Agentic Molecular Recovery via Molecule-Aware Exploration

Text-guided molecular generation with LLMs often yields invalid SMILES. We argue that invalid drafts should be addressed through a shift from validity-oriented repair to identity-preserving molecular recovery: the objective is not only to restore chemical validity, but also to preserve target-relevant structural cues and recover the molecular identity implied by the description. This perspective reveals the limitations of existing correction strategies. Post-hoc repair can recover validity while distorting key structures, LLM-only correction can introduce unintended global drift, and generic agentic correction remains constrained by greedy single-candidate trajectories even when equipped with executable RDKit edit tools. To address these limitations, we propose AMREC, which couples molecule-aware mismatch tracking with expanded candidate exploration and trajectory-level selection. On invalid ChEBI-20 drafts from three backbone models, AMREC achieves the strongest overall recovery profile across structural, exact-match, and string-level metrics.

Localizing Input Uncertainty Quantification for Large Language Models via Shapley Values

As large language models (LLMs) are increasingly integrated into high-stakes decision-making, the ability to reliably quantify uncertainty has become a critical requirement for safety and trust. However, current uncertainty quantification methods primarily operate at the output level, often failing to distinguish whether uncertainty arises from the model's lack of knowledge or from ambiguity in the user's input. While input-centric uncertainty quantification has recently emerged as a promising direction, it remains relatively underexplored and typically relies on coarse, input-level information. Consequently, users are provided with scalar uncertainty scores that offer little actionable guidance on which parts of the input should be clarified to improve reliability. To address this limitation, we propose Shapley-based input uncertainty Quantification (ShaQ), a framework for span-level attribution of input-induced uncertainty. Our approach models ambiguous spans in the input as players in a cooperative game and quantifies their contributions using Shapley values, defined via the weighted average of marginal reductions in conditional entropy obtained by clarifying each span coalition. Unlike existing input-level approaches, our formulation captures complex interactions among spans and provides a principled decomposition in which individual attributions sum exactly to the total input-induced uncertainty. We evaluate ShaQ on the AmbigQA and AmbiEnt benchmarks, where it achieves state-of-the-art performance in ambiguity detection. We further demonstrate its utility on MediTOD, showing that ShaQ can localize under-specified clinical utterances and facilitate human-AI collaboration in high-stakes settings. Overall, ShaQ improves uncertainty estimation and provides actionable insights for targeted input clarification.

ToDi: Token-wise Distillation via Fine-Grained Divergence Control

Large language models (LLMs) offer impressive performance but are impractical for resource-constrained deployment due to high latency and energy consumption. Knowledge distillation (KD) addresses this by transferring knowledge from a large teacher to a smaller student model. However, conventional KD, notably approaches like Forward KL (FKL) and Reverse KL (RKL), apply uniform divergence loss across the entire vocabulary, neglecting token-level prediction discrepancies. By investigating these representative divergences via gradient analysis, we reveal that FKL boosts underestimated tokens, while RKL suppresses overestimated ones, showing their complementary roles. Based on this observation, we propose Token-wise Distillation (ToDi), a novel method that adaptively combines FKL and RKL per token using a sigmoid-based weighting function derived from the teacher-student probability log-ratio. ToDi dynamically emphasizes the appropriate divergence for each token, enabling precise distribution alignment. We demonstrate that ToDi consistently outperforms recent distillation baselines using uniform or less granular strategies across instruction-following benchmarks. Extensive ablation studies and efficiency analysis further validate ToDi's effectiveness and practicality.