Graph Neural Network to Dilute Outliers for Refactoring Monolith Application

Microservices are becoming the defacto design choice for software architecture. It involves partitioning the software components into finer modules such that the development can happen independently. It also provides natural benefits when deployed on the cloud since resources can be allocated dynamically to necessary components based on demand. Therefore, enterprises as part of their journey to cloud, are increasingly looking to refactor their monolith application into one or more candidate microservices; wherein each service contains a group of software entities (e.g., classes) that are responsible for a common functionality. Graphs are a natural choice to represent a software system. Each software entity can be represented as nodes and its dependencies with other entities as links. Therefore, this problem of refactoring can be viewed as a graph based clustering task. In this work, we propose a novel method to adapt the recent advancements in graph neural networks in the context of code to better understand the software and apply them in the clustering task. In that process, we also identify the outliers in the graph which can be directly mapped to top refactor candidates in the software. Our solution is able to improve state-of-the-art performance compared to works from both software engineering and existing graph representation based techniques.

Semi-supervised Soil Moisture Prediction through Graph Neural Networks

Recent improvement and availability of remote satellite and IoT data offers interesting and diverse applications of artificial intelligence in precision agriculture. Soil moisture is an important component of multiple agricultural and food supply chain practices. It measures the amount of water stored in various depth of soil. Existing data driven approaches for soil moisture prediction use conventional models which fail to capture the dynamic dependency of soil moisture values in near-by locations over time. In this work, we propose to convert the problem of soil moisture prediction as a semi-supervised learning on temporal graphs. We propose a dynamic graph neural network which can use the dependency of related locations over a region to predict soil moisture. However, unlike social or information networks, graph structure is not explicitly given for soil moisture prediction. Hence, we incorporate the problem of graph structure learning in the framework of dynamic GNN. Our algorithm, referred as DGLR, provides an end-to-end learning which can predict soil moisture over multiple locations in a region over time and also update the graph structure in between. Our solution achieves state-of-the-art results on real-world soil moisture datasets compared to existing machine learning approaches.

Self-Expressive Graph Neural Network for Unsupervised Community Detection

Graph neural networks are able to achieve promising performance on multiple graph downstream tasks such as node classification and link prediction. Comparatively lesser work has been done to design graph neural networks (GNNs) which can operate directly for community detection in a graph. Traditionally, GNNs are trained on a semi-supervised or self-supervised loss function and then clustering algorithms are applied to detect communities. However, such decoupled approaches are inherently sub-optimal. Design of an unsupervised community detection loss function to train a GNN is a fundamental challenge to propose an integrated solution. To tackle this problem, we combine the principle of self-expressiveness with the framework of self-supervised graph neural network for unsupervised community detection for the first time in the literature. To improve the scalability of the approach, we propose a randomly sampled batch-wise training and use the principle of self-expressiveness to generate a subset of strong node similarity / dissimilarity values. These values are used to regularize the node communities obtained from a self-supervised graph neural network. Our solution is trained in an end-to-end fashion. We are able to achieve state-of-the-art community detection results on multiple publicly available datasets.

Integrating Network Embedding and Community Outlier Detection via Multiclass Graph Description

Network (or graph) embedding is the task to map the nodes of a graph to a lower dimensional vector space, such that it preserves the graph properties and facilitates the downstream network mining tasks. Real world networks often come with (community) outlier nodes, which behave differently from the regular nodes of the community. These outlier nodes can affect the embedding of the regular nodes, if not handled carefully. In this paper, we propose a novel unsupervised graph embedding approach (called DMGD) which integrates outlier and community detection with node embedding. We extend the idea of deep support vector data description to the framework of graph embedding when there are multiple communities present in the given network, and an outlier is characterized relative to its community. We also show the theoretical bounds on the number of outliers detected by DMGD. Our formulation boils down to an interesting minimax game between the outliers, community assignments and the node embedding function. We also propose an efficient algorithm to solve this optimization framework. Experimental results on both synthetic and real world networks show the merit of our approach compared to state-of-the-arts.

Robust Hierarchical Graph Classification with Subgraph Attention

Graph neural networks get significant attention for graph representation and classification in machine learning community. Attention mechanism applied on the neighborhood of a node improves the performance of graph neural networks. Typically, it helps to identify a neighbor node which plays more important role to determine the label of the node under consideration. But in real world scenarios, a particular subset of nodes together, but not the individual pairs in the subset, may be important to determine the label of the graph. To address this problem, we introduce the concept of subgraph attention for graphs. On the other hand, hierarchical graph pooling has been shown to be promising in recent literature. But due to noisy hierarchical structure of real world graphs, not all the hierarchies of a graph play equal role for graph classification. Towards this end, we propose a graph classification algorithm called SubGattPool which jointly learns the subgraph attention and employs two different types of hierarchical attention mechanisms to find the important nodes in a hierarchy and the importance of individual hierarchies in a graph. Experimental evaluation with different types of graph classification algorithms shows that SubGattPool is able to improve the state-of-the-art or remains competitive on multiple publicly available graph classification datasets. We conduct further experiments on both synthetic and real world graph datasets to justify the usefulness of different components of SubGattPool and to show its consistent performance on other downstream tasks.

Unsupervised Graph Representation by Periphery and Hierarchical Information Maximization

Deep representation learning on non-Euclidean data types, such as graphs, has gained significant attention in recent years. Invent of graph neural networks has improved the state-of-the-art for both node and the entire graph representation in a vector space. However, for the entire graph representation, most of the existing graph neural networks are trained on a graph classification loss in a supervised way. But obtaining labels of a large number of graphs is expensive for real world applications. Thus, we aim to propose an unsupervised graph neural network to generate a vector representation of an entire graph in this paper. For this purpose, we combine the idea of hierarchical graph neural networks and mutual information maximization into a single framework. We also propose and use the concept of periphery representation of a graph and show its usefulness in the proposed algorithm which is referred as GraPHmax. We conduct thorough experiments on several real-world graph datasets and compare the performance of GraPHmax with a diverse set of both supervised and unsupervised baseline algorithms. Experimental results show that we are able to improve the state-of-the-art for multiple graph level tasks on several real-world datasets, while remain competitive on the others.

Line Hypergraph Convolution Network: Applying Graph Convolution for Hypergraphs

Network representation learning and node classification in graphs got significant attention due to the invent of different types graph neural networks. Graph convolution network (GCN) is a popular semi-supervised technique which aggregates attributes within the neighborhood of each node. Conventional GCNs can be applied to simple graphs where each edge connects only two nodes. But many modern days applications need to model high order relationships in a graph. Hypergraphs are effective data types to handle such complex relationships. In this paper, we propose a novel technique to apply graph convolution on hypergraphs with variable hyperedge sizes. We use the classical concept of line graph of a hypergraph for the first time in the hypergraph learning literature. Then we propose to use graph convolution on the line graph of a hypergraph. Experimental analysis on multiple real world network datasets shows the merit of our approach compared to state-of-the-arts.

Beyond Node Embedding: A Direct Unsupervised Edge Representation Framework for Homogeneous Networks

Network representation learning has traditionally been used to find lower dimensional vector representations of the nodes in a network. However, there are very important edge driven mining tasks of interest to the classical network analysis community, which have mostly been unexplored in the network embedding space. For applications such as link prediction in homogeneous networks, vector representation (i.e., embedding) of an edge is derived heuristically just by using simple aggregations of the embeddings of the end vertices of the edge. Clearly, this method of deriving edge embedding is suboptimal and there is a need for a dedicated unsupervised approach for embedding edges by leveraging edge properties of the network. Towards this end, we propose a novel concept of converting a network to its weighted line graph which is ideally suited to find the embedding of edges of the original network. We further derive a novel algorithm to embed the line graph, by introducing the concept of collective homophily. To the best of our knowledge, this is the first direct unsupervised approach for edge embedding in homogeneous information networks, without relying on the node embeddings. We validate the edge embeddings on three downstream edge mining tasks. Our proposed optimization framework for edge embedding also generates a set of node embeddings, which are not just the aggregation of edges. Further experimental analysis shows the connection of our framework to the concept of node centrality.

Outlier Aware Network Embedding for Attributed Networks

Attributed network embedding has received much interest from the research community as most of the networks come with some content in each node, which is also known as node attributes. Existing attributed network approaches work well when the network is consistent in structure and attributes, and nodes behave as expected. But real world networks often have anomalous nodes. Typically these outliers, being relatively unexplainable, affect the embeddings of other nodes in the network. Thus all the downstream network mining tasks fail miserably in the presence of such outliers. Hence an integrated approach to detect anomalies and reduce their overall effect on the network embedding is required. Towards this end, we propose an unsupervised outlier aware network embedding algorithm (ONE) for attributed networks, which minimizes the effect of the outlier nodes, and hence generates robust network embeddings. We align and jointly optimize the loss functions coming from structure and attributes of the network. To the best of our knowledge, this is the first generic network embedding approach which incorporates the effect of outliers for an attributed network without any supervision. We experimented on publicly available real networks and manually planted different types of outliers to check the performance of the proposed algorithm. Results demonstrate the superiority of our approach to detect the network outliers compared to the state-of-the-art approaches. We also consider different downstream machine learning applications on networks to show the efficiency of ONE as a generic network embedding technique. The source code is made available at https://github.com/sambaranban/ONE.