Revisiting Document-Level Relation Extraction with Context-Guided Link Prediction

Document-level relation extraction (DocRE) poses the challenge of identifying relationships between entities within a document as opposed to the traditional RE setting where a single sentence is input. Existing approaches rely on logical reasoning or contextual cues from entities. This paper reframes document-level RE as link prediction over a knowledge graph with distinct benefits: 1) Our approach combines entity context with document-derived logical reasoning, enhancing link prediction quality. 2) Predicted links between entities offer interpretability, elucidating employed reasoning. We evaluate our approach on three benchmark datasets: DocRED, ReDocRED, and DWIE. The results indicate that our proposed method outperforms the state-of-the-art models and suggests that incorporating context-based link prediction techniques can enhance the performance of document-level relation extraction models.

ReOnto: A Neuro-Symbolic Approach for Biomedical Relation Extraction

Relation Extraction (RE) is the task of extracting semantic relationships between entities in a sentence and aligning them to relations defined in a vocabulary, which is generally in the form of a Knowledge Graph (KG) or an ontology. Various approaches have been proposed so far to address this task. However, applying these techniques to biomedical text often yields unsatisfactory results because it is hard to infer relations directly from sentences due to the nature of the biomedical relations. To address these issues, we present a novel technique called ReOnto, that makes use of neuro symbolic knowledge for the RE task. ReOnto employs a graph neural network to acquire the sentence representation and leverages publicly accessible ontologies as prior knowledge to identify the sentential relation between two entities. The approach involves extracting the relation path between the two entities from the ontology. We evaluate the effect of using symbolic knowledge from ontologies with graph neural networks. Experimental results on two public biomedical datasets, BioRel and ADE, show that our method outperforms all the baselines (approximately by 3\%).

Neuro-Symbolic RDF and Description Logic Reasoners: The State-Of-The-Art and Challenges

Ontologies are used in various domains, with RDF and OWL being prominent standards for ontology development. RDF is favored for its simplicity and flexibility, while OWL enables detailed domain knowledge representation. However, as ontologies grow larger and more expressive, reasoning complexity increases, and traditional reasoners struggle to perform efficiently. Despite optimization efforts, scalability remains an issue. Additionally, advancements in automated knowledge base construction have created large and expressive ontologies that are often noisy and inconsistent, posing further challenges for conventional reasoners. To address these challenges, researchers have explored neuro-symbolic approaches that combine neural networks' learning capabilities with symbolic systems' reasoning abilities. In this chapter,we provide an overview of the existing literature in the field of neuro-symbolic deductive reasoning supported by RDF(S), the description logics EL and ALC, and OWL 2 RL, discussing the techniques employed, the tasks they address, and other relevant efforts in this area.

A Planning Ontology to Represent and Exploit Planning Knowledge for Performance Efficiency

Ontologies are known for their ability to organize rich metadata, support the identification of novel insights via semantic queries, and promote reuse. In this paper, we consider the problem of automated planning, where the objective is to find a sequence of actions that will move an agent from an initial state of the world to a desired goal state. We hypothesize that given a large number of available planners and diverse planning domains; they carry essential information that can be leveraged to identify suitable planners and improve their performance for a domain. We use data on planning domains and planners from the International Planning Competition (IPC) to construct a planning ontology and demonstrate via experiments in two use cases that the ontology can lead to the selection of promising planners and improving their performance using macros - a form of action ordering constraints extracted from planning ontology. We also make the planning ontology and associated resources available to the community to promote further research.

OntoSeer -- A Recommendation System to Improve the Quality of Ontologies

Building an ontology is not only a time-consuming process, but it is also confusing, especially for beginners and the inexperienced. Although ontology developers can take the help of domain experts in building an ontology, they are not readily available in several cases for a variety of reasons. Ontology developers have to grapple with several questions related to the choice of classes, properties, and the axioms that should be included. Apart from this, there are aspects such as modularity and reusability that should be taken care of. From among the thousands of publicly available ontologies and vocabularies in repositories such as Linked Open Vocabularies (LOV) and BioPortal, it is hard to know the terms (classes and properties) that can be reused in the development of an ontology. A similar problem exists in implementing the right set of ontology design patterns (ODPs) from among the several available. Generally, ontology developers make use of their experience in handling these issues, and the inexperienced ones have a hard time. In order to bridge this gap, we propose a tool named OntoSeer, that monitors the ontology development process and provides suggestions in real-time to improve the quality of the ontology under development. It can provide suggestions on the naming conventions to follow, vocabulary to reuse, ODPs to implement, and axioms to be added to the ontology. OntoSeer has been implemented as a Prot\'eg\'e plug-in.

SERC: Syntactic and Semantic Sequence based Event Relation Classification

Temporal and causal relations play an important role in determining the dependencies between events. Classifying the temporal and causal relations between events has many applications, such as generating event timelines, event summarization, textual entailment and question answering. Temporal and causal relations are closely related and influence each other. So we propose a joint model that incorporates both temporal and causal features to perform causal relation classification. We use the syntactic structure of the text for identifying temporal and causal relations between two events from the text. We extract parts-of-speech tag sequence, dependency tag sequence and word sequence from the text. We propose an LSTM based model for temporal and causal relation classification that captures the interrelations between the three encoded features. Evaluation of our model on four popular datasets yields promising results for temporal and causal relation classification.

Why Settle for Just One? Extending EL++ Ontology Embeddings with Many-to-Many Relationships

Knowledge Graph (KG) embeddings provide a low-dimensional representation of entities and relations of a Knowledge Graph and are used successfully for various applications such as question answering and search, reasoning, inference, and missing link prediction. However, most of the existing KG embeddings only consider the network structure of the graph and ignore the semantics and the characteristics of the underlying ontology that provides crucial information about relationships between entities in the KG. Recent efforts in this direction involve learning embeddings for a Description Logic (logical underpinning for ontologies) named EL++. However, such methods consider all the relations defined in the ontology to be one-to-one which severely limits their performance and applications. We provide a simple and effective solution to overcome this shortcoming that allows such methods to consider many-to-many relationships while learning embedding representations. Experiments conducted using three different EL++ ontologies show substantial performance improvement over five baselines. Our proposed solution also paves the way for learning embedding representations for even more expressive description logics such as SROIQ.