Object Detector Differences when using Synthetic and Real Training Data

To train well-performing generalizing neural networks, sufficiently large and diverse datasets are needed. Collecting data while adhering to privacy legislation becomes increasingly difficult and annotating these large datasets is both a resource-heavy and time-consuming task. An approach to overcome these difficulties is to use synthetic data since it is inherently scalable and can be automatically annotated. However, how training on synthetic data affects the layers of a neural network is still unclear. In this paper, we train the YOLOv3 object detector on real and synthetic images from city environments. We perform a similarity analysis using Centered Kernel Alignment (CKA) to explore the effects of training on synthetic data on a layer-wise basis. The analysis captures the architecture of the detector while showing both different and similar patterns between different models. With this similarity analysis we want to give insights on how training synthetic data affects each layer and to give a better understanding of the inner workings of complex neural networks. The results show that the largest similarity between a detector trained on real data and a detector trained on synthetic data was in the early layers, and the largest difference was in the head part. The results also show that no major difference in performance or similarity could be seen between frozen and unfrozen backbone.

EasyNER: A Customizable Easy-to-Use Pipeline for Deep Learning- and Dictionary-based Named Entity Recognition from Medical Text

Medical research generates a large number of publications with the PubMed database already containing >35 million research articles. Integration of the knowledge scattered across this large body of literature could provide key insights into physiological mechanisms and disease processes leading to novel medical interventions. However, it is a great challenge for researchers to utilize this information in full since the scale and complexity of the data greatly surpasses human processing abilities. This becomes especially problematic in cases of extreme urgency like the COVID-19 pandemic. Automated text mining can help extract and connect information from the large body of medical research articles. The first step in text mining is typically the identification of specific classes of keywords (e.g., all protein or disease names), so called Named Entity Recognition (NER). Here we present an end-to-end pipeline for NER of typical entities found in medical research articles, including diseases, cells, chemicals, genes/proteins, and species. The pipeline can access and process large medical research article collections (PubMed, CORD-19) or raw text and incorporates a series of deep learning models fine-tuned on the HUNER corpora collection. In addition, the pipeline can perform dictionary-based NER related to COVID-19 and other medical topics. Users can also load their own NER models and dictionaries to include additional entities. The output consists of publication-ready ranked lists and graphs of detected entities and files containing the annotated texts. An associated script allows rapid inspection of the results for specific entities of interest. As model use cases, the pipeline was deployed on two collections of autophagy-related abstracts from PubMed and on the CORD19 dataset, a collection of 764 398 research article abstracts related to COVID-19.

Connecting a French Dictionary from the Beginning of the 20th Century to Wikidata

The \textit{Petit Larousse illustr\'e} is a French dictionary first published in 1905. Its division in two main parts on language and on history and geography corresponds to a major milestone in French lexicography as well as a repository of general knowledge from this period. Although the value of many entries from 1905 remains intact, some descriptions now have a dimension that is more historical than contemporary. They are nonetheless significant to analyze and understand cultural representations from this time. A comparison with more recent information or a verification of these entries would require a tedious manual work. In this paper, we describe a new lexical resource, where we connected all the dictionary entries of the history and geography part to current data sources. For this, we linked each of these entries to a wikidata identifier. Using the wikidata links, we can automate more easily the identification, comparison, and verification of historically-situated representations. We give a few examples on how to process wikidata identifiers and we carried out a small analysis of the entities described in the dictionary to outline possible applications. The resource, i.e. the annotation of 20,245 dictionary entries with wikidata links, is available from GitHub url{https://github.com/pnugues/petit_larousse_1905/

Overview of the Ugglan Entity Discovery and Linking System

Ugglan is a system designed to discover named entities and link them to unique identifiers in a knowledge base. It is based on a combination of a name and nominal dictionary derived from Wikipedia and Wikidata, a named entity recognition module (NER) using fixed ordinally-forgetting encoding (FOFE) trained on the TAC EDL data from 2014-2016, a candidate generation module from the Wikipedia link graph across multiple editions, a PageRank link and cooccurrence graph disambiguator, and finally a reranker trained on the TAC EDL 2015-2016 data.

Generating a 3D Simulation of a Car Accident from a Written Description in Natural Language: the CarSim System

This paper describes a prototype system to visualize and animate 3D scenes from car accident reports, written in French. The problem of generating such a 3D simulation can be divided into two subtasks: the linguistic analysis and the virtual scene generation. As a means of communication between these two modules, we first designed a template formalism to represent a written accident report. The CarSim system first processes written reports, gathers relevant information, and converts it into a formal description. Then, it creates the corresponding 3D scene and animates the vehicles.

Verbal Interactions in Virtual Worlds

We first discuss respective advantages of language interaction in virtual worlds and of using 3D images in dialogue systems. Then, we describe an example of a verbal interaction system in virtual reality: Ulysse. Ulysse is a conversational agent that helps a user navigate in virtual worlds. It has been designed to be embedded in the representation of a participant of a virtual conference and it responds positively to motion orders. Ulysse navigates the user's viewpoint on his/her behalf in the virtual world. On tests we carried out, we discovered that users, novices as well as experienced ones have difficulties moving in a 3D environment. Agents such as Ulysse enable a user to carry out navigation motions that would have been impossible with classical interaction devices. From the whole Ulysse system, we have stripped off a skeleton architecture that we have ported to VRML, Java, and Prolog. We hope this skeleton helps the design of language applications in virtual worlds.