Predicting Tuberculosis from Real-World Cough Audio Recordings and Metadata

Tuberculosis (TB) is an infectious disease caused by the bacterium Mycobacterium tuberculosis and primarily affects the lungs, as well as other body parts. TB is spread through the air when an infected person coughs, sneezes, or talks. Medical doctors diagnose TB in patients via clinical examinations and specialized tests. However, coughing is a common symptom of respiratory diseases such as TB. Literature suggests that cough sounds coming from different respiratory diseases can be distinguished by both medical doctors and computer algorithms. Therefore, cough recordings associated with patients with and without TB seems to be a reasonable avenue of investigation. In this work, we utilize a very large dataset of TB and non-TB cough audio recordings obtained from the south-east of Africa, India, and the south-east of Asia using a fully automated phone-based application (Hyfe), without manual annotation. We fit statistical classifiers based on spectral and time domain features with and without clinical metadata. A stratified grouped cross-validation approach shows that an average Area Under Curve (AUC) of approximately 0.70 $\pm$ 0.05 both for a cough-level and a participant-level classification can be achieved using cough sounds alone. The addition of demographic and clinical factors increases performance, resulting in an average AUC of approximately 0.81 $\pm$ 0.05. Our results suggest mobile phone-based applications that integrate clinical symptoms and cough sound analysis could help community health workers and, most importantly, health service programs to improve TB case-finding efforts while reducing costs, which could substantially improve public health.

Using Search Queries to Understand Health Information Needs in Africa

The lack of comprehensive, high-quality health data in developing nations creates a roadblock for combating the impacts of disease. One key challenge is understanding the health information needs of people in these nations. Without understanding people's everyday needs, concerns, and misconceptions, health organizations and policymakers lack the ability to effectively target education and programming efforts. In this paper, we propose a bottom-up approach that uses search data from individuals to uncover and gain insight into health information needs in Africa. We analyze Bing searches related to HIV/AIDS, malaria, and tuberculosis from all 54 African nations. For each disease, we automatically derive a set of common search themes or topics, revealing a wide-spread interest in various types of information, including disease symptoms, drugs, concerns about breastfeeding, as well as stigma, beliefs in natural cures, and other topics that may be hard to uncover through traditional surveys. We expose the different patterns that emerge in health information needs by demographic groups (age and sex) and country. We also uncover discrepancies in the quality of content returned by search engines to users by topic. Combined, our results suggest that search data can help illuminate health information needs in Africa and inform discussions on health policy and targeted education efforts both on- and offline.