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PersGNN: Applying Topological Data Analysis and Geometric Deep Learning to Structure-Based Protein Function Prediction


Oct 30, 2020
Nicolas Swenson, Aditi S. Krishnapriyan, Aydin Buluc, Dmitriy Morozov, Katherine Yelick

* The first two authors contributed equally to this work 

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Reducing Communication in Graph Neural Network Training


May 07, 2020
Alok Tripathy, Katherine Yelick, Aydin Buluc


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Communication-Avoiding Optimization Methods for Distributed Massive-Scale Sparse Inverse Covariance Estimation


Apr 08, 2018
Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluc, Dmitriy Morozov, Leonid Oliker, Katherine Yelick, Sang-Yun Oh

* Main paper: 15 pages, appendix: 24 pages 

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Accelerating Science: A Computing Research Agenda


Apr 06, 2016
Vasant G. Honavar, Mark D. Hill, Katherine Yelick

* Computing Community Consortium (CCC) white paper, 17 pages 

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