Plant species richness prediction from DESIS hyperspectral data: A comparison study on feature extraction procedures and regression models

The diversity of terrestrial vascular plants plays a key role in maintaining the stability and productivity of ecosystems. Monitoring species compositional diversity across large spatial scales is challenging and time consuming. The advanced spectral and spatial specification of the recently launched DESIS (the DLR Earth Sensing Imaging Spectrometer) instrument provides a unique opportunity to test the potential for monitoring plant species diversity with spaceborne hyperspectral data. This study provides a quantitative assessment on the ability of DESIS hyperspectral data for predicting plant species richness in two different habitat types in southeast Australia. Spectral features were first extracted from the DESIS spectra, then regressed against on-ground estimates of plant species richness, with a two-fold cross validation scheme to assess the predictive performance. We tested and compared the effectiveness of Principal Component Analysis (PCA), Canonical Correlation Analysis (CCA), and Partial Least Squares analysis (PLS) for feature extraction, and Kernel Ridge Regression (KRR), Gaussian Process Regression (GPR), Random Forest Regression (RFR) for species richness prediction. The best prediction results were r=0.76 and RMSE=5.89 for the Southern Tablelands region, and r=0.68 and RMSE=5.95 for the Snowy Mountains region. Relative importance analysis for the DESIS spectral bands showed that the red-edge, red, and blue spectral regions were more important for predicting plant species richness than the green bands and the near-infrared bands beyond red-edge. We also found that the DESIS hyperspectral data performed better than Sentinel-2 multispectral data in the prediction of plant species richness. Our results provide a quantitative reference for future studies exploring the potential of spaceborne hyperspectral data for plant biodiversity mapping.

Quantitative Assessment of DESIS Hyperspectral Data for Plant Biodiversity Estimation in Australia

Diversity of terrestrial plants plays a key role in maintaining a stable, healthy, and productive ecosystem. Though remote sensing has been seen as a promising and cost-effective proxy for estimating plant diversity, there is a lack of quantitative studies on how confidently plant diversity can be inferred from spaceborne hyperspectral data. In this study, we assessed the ability of hyperspectral data captured by the DLR Earth Sensing Imaging Spectrometer (DESIS) for estimating plant species richness in the Southern Tablelands and Snowy Mountains regions in southeast Australia. Spectral features were firstly extracted from DESIS spectra with principal component analysis, canonical correlation analysis, and partial least squares analysis. Then regression was conducted between the extracted features and plant species richness with ordinary least squares regression, kernel ridge regression, and Gaussian process regression. Results were assessed with the coefficient of correlation ($r$) and Root-Mean-Square Error (RMSE), based on a two-fold cross validation scheme. With the best performing model, $r$ is 0.71 and RMSE is 5.99 for the Southern Tablelands region, while $r$ is 0.62 and RMSE is 6.20 for the Snowy Mountains region. The assessment results reported in this study provide supports for future studies on understanding the relationship between spaceborne hyperspectral measurements and terrestrial plant biodiversity.