Abstract:Extensive studies suggested that fluid mechanical markers of intracranial aneurysms (IAs) derived from Computational Fluid Dynamics (CFD) can indicate disease progression risks, but to date this has not been translated clinically. This is because CFD requires specialized expertise and is time-consuming and low throughput, making it difficult to support clinical trials. A deep learning model that maps IA morphology to biomechanical markers can address this, enabling physicians to obtain these markers in real time without performing CFD. Here, we show that a Graph Transformer model that incorporates temporal information, which is supervised by large CFD data, can accurately predict Wall Shear Stress (WSS) across the cardiac cycle from IA surface meshes. The model effectively captures the temporal variations of the WSS pattern, achieving a Structural Similarity Index (SSIM) of up to 0.981 and a maximum-based relative L2 error of 2.8%. Ablation studies and SOTA comparison confirmed its optimality. Further, as pulsatile CFD data is computationally expensive to generate and sample sizes are limited, we engaged a strategy of injecting a large amount of steady-state CFD data, which are extremely low-cost to generate, as augmentation. This approach enhances network performance substantially when pulsatile CFD data sample size is small. Our study provides a proof of concept that temporal sequences cardiovascular fluid mechanical parameters can be computed in real time using a deep learning model from the geometric mesh, and this is achievable even with small pulsatile CFD sample size. Our approach is likely applicable to other cardiovascular scenarios.
Abstract:Multiple object tracking (MOT) technology has made significant progress in terrestrial applications, but underwater tracking scenarios remain underexplored despite their importance to marine ecology and aquaculture. We present Multiple Fish Tracking Dataset 2025 (MFT25), the first comprehensive dataset specifically designed for underwater multiple fish tracking, featuring 15 diverse video sequences with 408,578 meticulously annotated bounding boxes across 48,066 frames. Our dataset captures various underwater environments, fish species, and challenging conditions including occlusions, similar appearances, and erratic motion patterns. Additionally, we introduce Scale-aware and Unscented Tracker (SU-T), a specialized tracking framework featuring an Unscented Kalman Filter (UKF) optimized for non-linear fish swimming patterns and a novel Fish-Intersection-over-Union (FishIoU) matching that accounts for the unique morphological characteristics of aquatic species. Extensive experiments demonstrate that our SU-T baseline achieves state-of-the-art performance on MFT25, with 34.1 HOTA and 44.6 IDF1, while revealing fundamental differences between fish tracking and terrestrial object tracking scenarios. MFT25 establishes a robust foundation for advancing research in underwater tracking systems with important applications in marine biology, aquaculture monitoring, and ecological conservation. The dataset and codes are released at https://vranlee.github.io/SU-T/.