WISCA: A Consensus-Based Approach to Harmonizing Interpretability in Tabular Datasets

While predictive accuracy is often prioritized in machine learning (ML) models, interpretability remains essential in scientific and high-stakes domains. However, diverse interpretability algorithms frequently yield conflicting explanations, highlighting the need for consensus to harmonize results. In this study, six ML models were trained on six synthetic datasets with known ground truths, utilizing various model-agnostic interpretability techniques. Consensus explanations were generated using established methods and a novel approach: WISCA (Weighted Scaled Consensus Attributions), which integrates class probability and normalized attributions. WISCA consistently aligned with the most reliable individual method, underscoring the value of robust consensus strategies in improving explanation reliability.

SIBILA: High-performance computing and interpretable machine learning join efforts toward personalised medicine in a novel decision-making tool

Background and Objectives: Personalised medicine remains a major challenge for scientists. The rapid growth of Machine learning and Deep learning has made it a feasible alternative for predicting the most appropriate therapy for individual patients. However, the lack of interpretation of their results and high computational requirements make many reluctant to use these methods. Methods: Several Machine learning and Deep learning models have been implemented into a single software tool, SIBILA. Once the models are trained, SIBILA applies a range of interpretability methods to identify the input features that each model considered the most important to predict. In addition, all the features obtained are put in common to estimate the global attribution of each variable to the predictions. To facilitate its use by non-experts, SIBILA is also available to all users free of charge as a web server at https://bio-hpc.ucam.edu/sibila/. Results: SIBILA has been applied to three case studies to show its accuracy and efficiency in classification and regression problems. The first two cases proved that SIBILA can make accurate predictions even on uncleaned datasets. The last case demonstrates that SIBILA can be applied to medical contexts with real data. Conclusion: With the aim of becoming a powerful decision-making tool for clinicians, SIBILA has been developed. SIBILA is a novel software tool that leverages interpretable machine learning to make accurate predictions and explain how models made those decisions. SIBILA can be run on high-performance computing platforms, drastically reducing computing times.

When will the mist clear? On the Interpretability of Machine Learning for Medical Applications: a survey

Artificial Intelligence is providing astonishing results, with medicine being one of its favourite playgrounds. In a few decades, computers may be capable of formulating diagnoses and choosing the correct treatment, while robots may perform surgical operations, and conversational agents could interact with patients as virtual coaches. Machine Learning and, in particular, Deep Neural Networks are behind this revolution. In this scenario, important decisions will be controlled by standalone machines that have learned predictive models from provided data. Among the most challenging targets of interest in medicine are cancer diagnosis and therapies but, to start this revolution, software tools need to be adapted to cover the new requirements. In this sense, learning tools are becoming a commodity in Python and Matlab libraries, just to name two, but to exploit all their possibilities, it is essential to fully understand how models are interpreted and which models are more interpretable than others. In this survey, we analyse current machine learning models, frameworks, databases and other related tools as applied to medicine - specifically, to cancer research - and we discuss their interpretability, performance and the necessary input data. From the evidence available, ANN, LR and SVM have been observed to be the preferred models. Besides, CNNs, supported by the rapid development of GPUs and tensor-oriented programming libraries, are gaining in importance. However, the interpretability of results by doctors is rarely considered which is a factor that needs to be improved. We therefore consider this study to be a timely contribution to the issue.