Accelerating Experimental Design by Incorporating Experimenter Hunches

Experimental design is a process of obtaining a product with target property via experimentation. Bayesian optimization offers a sample-efficient tool for experimental design when experiments are expensive. Often, expert experimenters have 'hunches' about the behavior of the experimental system, offering potentials to further improve the efficiency. In this paper, we consider per-variable monotonic trend in the underlying property that results in a unimodal trend in those variables for a target value optimization. For example, sweetness of a candy is monotonic to the sugar content. However, to obtain a target sweetness, the utility of the sugar content becomes a unimodal function, which peaks at the value giving the target sweetness and falls off both ways. In this paper, we propose a novel method to solve such problems that achieves two main objectives: a) the monotonicity information is used to the fullest extent possible, whilst ensuring that b) the convergence guarantee remains intact. This is achieved by a two-stage Gaussian process modeling, where the first stage uses the monotonicity trend to model the underlying property, and the second stage uses `virtual' samples, sampled from the first, to model the target value optimization function. The process is made theoretically consistent by adding appropriate adjustment factor in the posterior computation, necessitated because of using the `virtual' samples. The proposed method is evaluated through both simulations and real world experimental design problems of a) new short polymer fiber with the target length, and b) designing of a new three dimensional porous scaffolding with a target porosity. In all scenarios our method demonstrates faster convergence than the basic Bayesian optimization approach not using such `hunches'.

Kernel Pre-Training in Feature Space via m-Kernels

This paper presents a novel approach to kernel tuning. The method presented borrows techniques from reproducing kernel Banach space (RKBS) theory and tensor kernels and leverages them to convert (re-weight in feature space) existing kernel functions into new, problem-specific kernels using auxiliary data. The proposed method is applied to accelerating Bayesian optimisation via covariance (kernel) function pre-tuning for short-polymer fibre manufacture and alloy design.

Covariance Function Pre-Training with m-Kernels for Accelerated Bayesian Optimisation

The paper presents a novel approach to direct covariance function learning for Bayesian optimisation, with particular emphasis on experimental design problems where an existing corpus of condensed knowledge is present. The method presented borrows techniques from reproducing kernel Banach space theory (specifically m-kernels) and leverages them to convert (or re-weight) existing covariance functions into new, problem-specific covariance functions. The key advantage of this approach is that rather than relying on the user to manually select (with some hyperparameter tuning and experimentation) an appropriate covariance function it constructs the covariance function to specifically match the problem at hand. The technique is demonstrated on two real-world problems - specifically alloy design and short-polymer fibre manufacturing - as well as a selected test function.

Automatic Detection of Pulmonary Embolism using Computational Intelligence

This article describes the implementation of a system designed to automatically detect the presence of pulmonary embolism in lung scans. These images are firstly segmented, before alignment and feature extraction using PCA. The neural network was trained using the Hybrid Monte Carlo method, resulting in a committee of 250 neural networks and good results are obtained.