The Exact Equivalence of Distance and Kernel Methods for Hypothesis Testing

Distance-based methods, also called "energy statistics", are leading methods for two-sample and independence tests from the statistics community. Kernel methods, developed from "kernel mean embeddings", are leading methods for two-sample and independence tests from the machine learning community. Previous works demonstrated the equivalence of distance and kernel methods only at the population level, for each kind of test, requiring an embedding theory of kernels. We propose a simple, bijective transformation between semimetrics and nondegenerate kernels. We prove that for finite samples, two-sample tests are special cases of independence tests, and the distance-based statistic is equivalent to the kernel-based statistic, including the biased, unbiased, and normalized versions. In other words, upon setting the kernel or metric to be bijective of each other, running any of the four algorithms will yield the exact same answer up to numerical precision. This deepens and unifies our understanding of interpoint comparison based methods.