Abstract:Citation graphs are fundamental tools for modeling scientific structure, but are often fragmented due to missing citations of scientifically connected articles. To address this issue, we propose a computationally efficient hybrid framework integrating citation topology with large language model (LLM)-based text similarity. Using 662,369 Web of Science publications in Mathematics and Operations Research & Management Science, we augment the original graph by adding semantic edges from small, disconnected components and weighting existing citations according to textual similarity. Semantic augmentation substantially reduces fragmentation while preserving disciplinary homogeneity. Compared to embedding-only clustering, cluster detection on augmented graphs using the Leiden algorithm retains structural interpretability while offering multi-scale organization. The method scales efficiently to large datasets and offers a practical strategy for strengthening citation-based indicators without collapsing disciplinary boundaries.
Abstract:Fuzzy clustering, which allows an article to belong to multiple clusters with soft membership degrees, plays a vital role in analyzing publication data. This problem can be formulated as a constrained optimization model, where the goal is to minimize the discrepancy between the similarity observed from data and the similarity derived from a predicted distribution. While this approach benefits from leveraging state-of-the-art optimization algorithms, tailoring them to work with real, massive databases like OpenAlex or Web of Science - containing about 70 million articles and a billion citations - poses significant challenges. We analyze potentials and challenges of the approach from both mathematical and computational perspectives. Among other things, second-order optimality conditions are established, providing new theoretical insights, and practical solution methods are proposed by exploiting the structure of the problem. Specifically, we accelerate the gradient projection method using GPU-based parallel computing to efficiently handle large-scale data.