Segmentation of fundus vascular images based on a dual-attention mechanism

Accurately segmenting blood vessels in retinal fundus images is crucial in the early screening, diagnosing, and evaluating some ocular diseases. However, significant light variations and non-uniform contrast in these images make segmentation quite challenging. Thus, this paper employ an attention fusion mechanism that combines the channel attention and spatial attention mechanisms constructed by Transformer to extract information from retinal fundus images in both spatial and channel dimensions. To eliminate noise from the encoder image, a spatial attention mechanism is introduced in the skip connection. Moreover, a Dropout layer is employed to randomly discard some neurons, which can prevent overfitting of the neural network and improve its generalization performance. Experiments were conducted on publicly available datasets DERIVE, STARE, and CHASEDB1. The results demonstrate that our method produces satisfactory results compared to some recent retinal fundus image segmentation algorithms.

Curvilinear object segmentation in medical images based on ODoS filter and deep learning network

Automatic segmentation of curvilinear objects in medical images plays an important role in the diagnosis and evaluation of human diseases, yet it is a challenging uncertainty for the complex segmentation task due to different issues like various image appearance, low contrast between curvilinear objects and their surrounding backgrounds, thin and uneven curvilinear structures, and improper background illumination. To overcome these challenges, we present a unique curvilinear structure segmentation framework based on oriented derivative of stick (ODoS) filter and deep learning network for curvilinear object segmentation in medical images. Currently, a large number of deep learning models emphasis on developing deep architectures and ignore capturing the structural features of curvature objects, which may lead to unsatisfactory results. In consequence, a new approach that incorporates the ODoS filter as part of a deep learning network is presented to improve the spatial attention of curvilinear objects. In which, the original image is considered as principal part to describe various image appearance and complex background illumination, the multi-step strategy is used to enhance contrast between curvilinear objects and their surrounding backgrounds, and the vector field is applied to discriminate thin and uneven curvilinear structures. Subsequently, a deep learning framework is employed to extract varvious structural features for curvilinear object segmentation in medical images. The performance of the computational model was validated in experiments with publicly available DRIVE, STARE and CHASEDB1 datasets. Experimental results indicate that the presented model has yielded surprising results compared with some state-of-the-art methods.

Pulmonary Fissure Segmentation in CT Images Based on ODoS Filter and Shape Features

Priori knowledge of pulmonary anatomy plays a vital role in diagnosis of lung diseases. In CT images, pulmonary fissure segmentation is a formidable mission due to various of factors. To address the challenge, an useful approach based on ODoS filter and shape features is presented for pulmonary fissure segmentation. Here, we adopt an ODoS filter by merging the orientation information and magnitude information to highlight structure features for fissure enhancement, which can effectively distinguish between pulmonary fissures and clutters. Motivated by the fact that pulmonary fissures appear as linear structures in 2D space and planar structures in 3D space in orientation field, an orientation curvature criterion and an orientation partition scheme are fused to separate fissure patches and other structures in different orientation partition, which can suppress parts of clutters. Considering the shape difference between pulmonary fissures and tubular structures in magnitude field, a shape measure approach and a 3D skeletonization model are combined to segment pulmonary fissures for clutters removal. When applying our scheme to 55 chest CT scans which acquired from a publicly available LOLA11 datasets, the median F1-score, False Discovery Rate (FDR), and False Negative Rate (FNR) respectively are 0.896, 0.109, and 0.100, which indicates that the presented method has a satisfactory pulmonary fissure segmentation performance.