MA-COIR: Leveraging Semantic Search Index and Generative Models for Ontology-Driven Biomedical Concept Recognition

Recognizing biomedical concepts in the text is vital for ontology refinement, knowledge graph construction, and concept relationship discovery. However, traditional concept recognition methods, relying on explicit mention identification, often fail to capture complex concepts not explicitly stated in the text. To overcome this limitation, we introduce MA-COIR, a framework that reformulates concept recognition as an indexing-recognition task. By assigning semantic search indexes (ssIDs) to concepts, MA-COIR resolves ambiguities in ontology entries and enhances recognition efficiency. Using a pretrained BART-based model fine-tuned on small datasets, our approach reduces computational requirements to facilitate adoption by domain experts. Furthermore, we incorporate large language models (LLMs)-generated queries and synthetic data to improve recognition in low-resource settings. Experimental results on three scenarios (CDR, HPO, and HOIP) highlight the effectiveness of MA-COIR in recognizing both explicit and implicit concepts without the need for mention-level annotations during inference, advancing ontology-driven concept recognition in biomedical domain applications. Our code and constructed data are available at https://github.com/sl-633/macoir-master.

Recent Trends in Personalized Dialogue Generation: A Review of Datasets, Methodologies, and Evaluations

Enhancing user engagement through personalization in conversational agents has gained significance, especially with the advent of large language models that generate fluent responses. Personalized dialogue generation, however, is multifaceted and varies in its definition -- ranging from instilling a persona in the agent to capturing users' explicit and implicit cues. This paper seeks to systemically survey the recent landscape of personalized dialogue generation, including the datasets employed, methodologies developed, and evaluation metrics applied. Covering 22 datasets, we highlight benchmark datasets and newer ones enriched with additional features. We further analyze 17 seminal works from top conferences between 2021-2023 and identify five distinct types of problems. We also shed light on recent progress by LLMs in personalized dialogue generation. Our evaluation section offers a comprehensive summary of assessment facets and metrics utilized in these works. In conclusion, we discuss prevailing challenges and envision prospect directions for future research in personalized dialogue generation.

Zero-resource Machine Translation by Multimodal Encoder-decoder Network with Multimedia Pivot

We propose an approach to build a neural machine translation system with no supervised resources (i.e., no parallel corpora) using multimodal embedded representation over texts and images. Based on the assumption that text documents are often likely to be described with other multimedia information (e.g., images) somewhat related to the content, we try to indirectly estimate the relevance between two languages. Using multimedia as the "pivot", we project all modalities into one common hidden space where samples belonging to similar semantic concepts should come close to each other, whatever the observed space of each sample is. This modality-agnostic representation is the key to bridging the gap between different modalities. Putting a decoder on top of it, our network can flexibly draw the outputs from any input modality. Notably, in the testing phase, we need only source language texts as the input for translation. In experiments, we tested our method on two benchmarks to show that it can achieve reasonable translation performance. We compared and investigated several possible implementations and found that an end-to-end model that simultaneously optimized both rank loss in multimodal encoders and cross-entropy loss in decoders performed the best.