Protein-Based Fish Species Identification: Dataset, Models, and Insights from Native Bangladeshi Fish

Correct identification of fish species is highly significant for food security, economic development, and climate resilience in Bangladesh. Protein sequences directly reflect functional and evolutionary constraints which are important for species authentication and biodiversity monitoring. Yet there exists no benchmark for native Bangladeshi fish species identification from protein sequence. In this study, we addressed this gap by introducing the first curated dataset for nine native Bangladeshi fish species of 2845 high quality protein sequences. We also established the first protein sequence classification baseline for this domain through a systematic benchmarking of seven architectural paradigms. Moreover, we propose a realistic deployable novel hybrid architecture of MotifCNN and Transformer with Terminal-Aware Positional-Encoding (MotifCNN-Transformer+TA-PE). Our novel architecture achieves 79.80% accuracy with macro-F1 of 0.80. The highest 83.04% accuracy is achieved by finetuned protein language model ProtBERT that has 420M parameters and requires dual 16GB GPUs for inference. According to McNemar's test, ProtBERT's 3.24% accuracy gain over our MotifCNN-Transformer+TA-PE is statistically insignificant (p = 0.1120). Our novel architecture beats it among six of the nine classes in per class identification. Also our MotifCNN-Transformer+TA-PE is approximately 5x faster, 42x smaller, and supports 16x larger batch size than ProtBERT and has GPU free inference, making it more practical for deployment in resources constrained areas such as rural Bangladesh. Beyond this, our foundational work shows effects of phylogenetic relationships on sequence similarity and establishes pathways for fisheries management, food authentication and biodiversity conservation in South Asia's protein dependent economy.

BadODD: Bangladeshi Autonomous Driving Object Detection Dataset

We propose a comprehensive dataset for object detection in diverse driving environments across 9 districts in Bangladesh. The dataset, collected exclusively from smartphone cameras, provided a realistic representation of real-world scenarios, including day and night conditions. Most existing datasets lack suitable classes for autonomous navigation on Bangladeshi roads, making it challenging for researchers to develop models that can handle the intricacies of road scenarios. To address this issue, the authors proposed a new set of classes based on characteristics rather than local vehicle names. The dataset aims to encourage the development of models that can handle the unique challenges of Bangladeshi road scenarios for the effective deployment of autonomous vehicles. The dataset did not consist of any online images to simulate real-world conditions faced by autonomous vehicles. The classification of vehicles is challenging because of the diverse range of vehicles on Bangladeshi roads, including those not found elsewhere in the world. The proposed classification system is scalable and can accommodate future vehicles, making it a valuable resource for researchers in the autonomous vehicle sector.