Squeezing nnU-Nets with Knowledge Distillation for On-Board Cloud Detection

Cloud detection is a pivotal satellite image pre-processing step that can be performed both on the ground and on board a satellite to tag useful images. In the latter case, it can reduce the amount of data to downlink by pruning the cloudy areas, or to make a satellite more autonomous through data-driven acquisition re-scheduling. We approach this task with nnU-Nets, a self-reconfigurable framework able to perform meta-learning of a segmentation network over various datasets. Unfortunately, such models are commonly memory-inefficient due to their (very) large architectures. To benefit from them in on-board processing, we compress nnU-Nets with knowledge distillation into much smaller and compact U-Nets. Our experiments, performed over Sentinel-2 and Landsat-8 images revealed that nnU-Nets deliver state-of-the-art performance without any manual design. Our approach was ranked within the top 7% best solutions (across 847 teams) in the On Cloud N: Cloud Cover Detection Challenge, where we reached the Jaccard index of 0.882 over more than 10k unseen Sentinel-2 images (the winners obtained 0.897, the baseline U-Net with the ResNet-34 backbone: 0.817, and the classic Sentinel-2 image thresholding: 0.652). Finally, we showed that knowledge distillation enables to elaborate dramatically smaller (almost 280x) U-Nets when compared to nnU-Nets while still maintaining their segmentation capabilities.

Multitemporal and multispectral data fusion for super-resolution of Sentinel-2 images

Multispectral Sentinel-2 images are a valuable source of Earth observation data, however spatial resolution of their spectral bands limited to 10 m, 20 m, and 60 m ground sampling distance remains insufficient in many cases. This problem can be addressed with super-resolution, aimed at reconstructing a high-resolution image from a low-resolution observation. For Sentinel-2, spectral information fusion allows for enhancing the 20 m and 60 m bands to the 10 m resolution. Also, there were attempts to combine multitemporal stacks of individual Sentinel-2 bands, however these two approaches have not been combined so far. In this paper, we introduce DeepSent -- a new deep network for super-resolving multitemporal series of multispectral Sentinel-2 images. It is underpinned with information fusion performed simultaneously in the spectral and temporal dimensions to generate an enlarged multispectral image. In our extensive experimental study, we demonstrate that our solution outperforms other state-of-the-art techniques that realize either multitemporal or multispectral data fusion. Furthermore, we show that the advantage of DeepSent results from how these two fusion types are combined in a single architecture, which is superior to performing such fusion in a sequential manner. Importantly, we have applied our method to super-resolve real-world Sentinel-2 images, enhancing the spatial resolution of all the spectral bands to 3.3 m nominal ground sampling distance, and we compare the outcome with very high-resolution WorldView-2 images. We will publish our implementation upon paper acceptance, and we expect it will increase the possibilities of exploiting super-resolved Sentinel-2 images in real-life applications.

Self-Configuring nnU-Nets Detect Clouds in Satellite Images

Cloud detection is a pivotal satellite image pre-processing step that can be performed both on the ground and on board a satellite to tag useful images. In the latter case, it can help to reduce the amount of data to downlink by pruning the cloudy areas, or to make a satellite more autonomous through data-driven acquisition re-scheduling of the cloudy areas. We approach this important task with nnU-Nets, a self-reconfigurable framework able to perform meta-learning of a segmentation network over various datasets. Our experiments, performed over Sentinel-2 and Landsat-8 multispectral images revealed that nnU-Nets deliver state-of-the-art cloud segmentation performance without any manual design. Our approach was ranked within the top 7% best solutions (across 847 participating teams) in the On Cloud N: Cloud Cover Detection Challenge, where we reached the Jaccard index of 0.882 over more than 10k unseen Sentinel-2 image patches (the winners obtained 0.897, whereas the baseline U-Net with the ResNet-34 backbone used as an encoder: 0.817, and the classic Sentinel-2 image thresholding: 0.652).

MuS2: A Benchmark for Sentinel-2 Multi-Image Super-Resolution

Insufficient spatial resolution of satellite imagery, including Sentinel-2 data, is a serious limitation in many practical use cases. To mitigate this problem, super-resolution reconstruction is receiving considerable attention from the remote sensing community. When it is performed from multiple images captured at subsequent revisits, it may benefit from information fusion, leading to enhanced reconstruction accuracy. One of the obstacles in multi-image super-resolution consists in the scarcity of real-life benchmark datasets -- most of the research was performed for simulated data which do not fully reflect the operating conditions. In this letter, we introduce a new MuS2 benchmark for multi-image super-resolution reconstruction of Sentinel-2 images, with WorldView-2 imagery used as the high-resolution reference. Within MuS2, we publish the first end-to-end evaluation procedure for this problem which we expect to help the researchers in advancing the state of the art in multi-image super-resolution for Sentinel-2 imagery.

A Multibranch Convolutional Neural Network for Hyperspectral Unmixing

Hyperspectral unmixing remains one of the most challenging tasks in the analysis of such data. Deep learning has been blooming in the field and proved to outperform other classic unmixing techniques, and can be effectively deployed onboard Earth observation satellites equipped with hyperspectral imagers. In this letter, we follow this research pathway and propose a multi-branch convolutional neural network that benefits from fusing spectral, spatial, and spectral-spatial features in the unmixing process. The results of our experiments, backed up with the ablation study, revealed that our techniques outperform others from the literature and lead to higher-quality fractional abundance estimation. Also, we investigated the influence of reducing the training sets on the capabilities of all algorithms and their robustness against noise, as capturing large and representative ground-truth sets is time-consuming and costly in practice, especially in emerging Earth observation scenarios.

Graph Neural Networks Extract High-Resolution Cultivated Land Maps from Sentinel-2 Image Series

Maintaining farm sustainability through optimizing the agricultural management practices helps build more planet-friendly environment. The emerging satellite missions can acquire multi- and hyperspectral imagery which captures more detailed spectral information concerning the scanned area, hence allows us to benefit from subtle spectral features during the analysis process in agricultural applications. We introduce an approach for extracting 2.5 m cultivated land maps from 10 m Sentinel-2 multispectral image series which benefits from a compact graph convolutional neural network. The experiments indicate that our models not only outperform classical and deep machine learning techniques through delivering higher-quality segmentation maps, but also dramatically reduce the memory footprint when compared to U-Nets (almost 8k trainable parameters of our models, with up to 31M parameters of U-Nets). Such memory frugality is pivotal in the missions which allow us to uplink a model to the AI-powered satellite once it is in orbit, as sending large nets is impossible due to the time constraints.

Segmenting Hyperspectral Images Using Spectral-Spatial Convolutional Neural Networks With Training-Time Data Augmentation

Hyperspectral imaging provides detailed information about the scanned objects, as it captures their spectral characteristics within a large number of wavelength bands. Classification of such data has become an active research topic due to its wide applicability in a variety of fields. Deep learning has established the state of the art in the area, and it constitutes the current research mainstream. In this letter, we introduce a new spectral-spatial convolutional neural network, benefitting from a battery of data augmentation techniques which help deal with a real-life problem of lacking ground-truth training data. Our rigorous experiments showed that the proposed method outperforms other spectral-spatial techniques from the literature, and delivers precise hyperspectral classification in real time.

Fully-automated deep learning-powered system for DCE-MRI analysis of brain tumors

Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) plays an important role in diagnosis and grading of brain tumor. Although manual DCE biomarker extraction algorithms boost the diagnostic yield of DCE-MRI by providing quantitative information on tumor prognosis and prediction, they are time-consuming and prone to human error. In this paper, we propose a fully-automated, end-to-end system for DCE-MRI analysis of brain tumors. Our deep learning-powered technique does not require any user interaction, it yields reproducible results, and it is rigorously validated against benchmark (BraTS'17 for tumor segmentation, and a test dataset released by the Quantitative Imaging Biomarkers Alliance for the contrast-concentration fitting) and clinical (44 low-grade glioma patients) data. Also, we introduce a cubic model of the vascular input function used for pharmacokinetic modeling which significantly decreases the fitting error when compared with the state of the art, alongside a real-time algorithm for determination of the vascular input region. An extensive experimental study, backed up with statistical tests, showed that our system delivers state-of-the-art results (in terms of segmentation accuracy and contrast-concentration fitting) while requiring less than 3 minutes to process an entire input DCE-MRI study using a single GPU.

Transfer Learning for Segmenting Dimensionally-Reduced Hyperspectral Images

Deep learning has established the state of the art in multiple fields, including hyperspectral image analysis. However, training large-capacity learners to segment such imagery requires representative training sets. Acquiring such data is human-dependent and time-consuming, especially in Earth observation scenarios, where the hyperspectral data transfer is very costly and time-constrained. In this letter, we show how to effectively deal with a limited number and size of available hyperspectral ground-truth sets, and apply transfer learning for building deep feature extractors. Also, we exploit spectral dimensionality reduction to make our technique applicable over hyperspectral data acquired using different sensors, which may capture different numbers of hyperspectral bands. The experiments, performed over several benchmarks and backed up with statistical tests, indicated that our approach allows us to effectively train well-generalizing deep convolutional neural nets even using significantly reduced data.

On training deep networks for satellite image super-resolution

The capabilities of super-resolution reconstruction (SRR)---techniques for enhancing image spatial resolution---have been recently improved significantly by the use of deep convolutional neural networks. Commonly, such networks are learned using huge training sets composed of original images alongside their low-resolution counterparts, obtained with bicubic downsampling. In this paper, we investigate how the SRR performance is influenced by the way such low-resolution training data are obtained, which has not been explored up to date. Our extensive experimental study indicates that the training data characteristics have a large impact on the reconstruction accuracy, and the widely-adopted approach is not the most effective for dealing with satellite images. Overall, we argue that developing better training data preparation routines may be pivotal in making SRR suitable for real-world applications.