Abstract:The study of histopathological subtypes is valuable for the personalisation of effective treatment strategies for ovarian cancer. However, increasing diagnostic workloads present a challenge for UK pathology departments, leading to the rise in AI approaches. While traditional approaches in this field have relied on pre-computed, frozen image features, recent advances have shifted towards end-to-end feature extraction, providing an improvement in accuracy but at the expense of significantly reduced scalability during training and time-consuming experimentation. In this paper, we propose a new approach for subtype classification and localisation in ovarian cancer histopathology images using contrastive and prototype learning with pre-computed, frozen features via feature-space augmentations. Compared to DSMIL, our method achieves an improvement of 70.4\% and 15.3\% in F1 score for instance- and slide-level classification, respectively, along with AUC gains of 16.9\% for instance localisation and 2.3\% for slide classification, while maintaining the use of frozen patch features.
Abstract:Monitoring animal populations is crucial for assessing the health of ecosystems. Traditional methods, which require extensive fieldwork, are increasingly being supplemented by time-lapse camera-trap imagery combined with an automatic analysis of the image data. The latter usually involves some object detector aimed at detecting relevant targets (commonly animals) in each image, followed by some postprocessing to gather activity and population data. In this paper, we show that the performance of an object detector in a single frame of a time-lapse sequence can be improved by including spatio-temporal features from the prior frames. We propose a method that leverages temporal information by integrating two additional spatial feature channels which capture stationary and non-stationary elements of the scene and consequently improve scene understanding and reduce the number of stationary false positives. The proposed technique achieves a significant improvement of 24\% in mean average precision (mAP@0.05:0.95) over the baseline (temporal feature-free, single frame) object detector on a large dataset of breeding tropical seabirds. We envisage our method will be widely applicable to other wildlife monitoring applications that use time-lapse imaging.