Unsupervised Deep Learning-based Keypoint Localization Estimating Descriptor Matching Performance

Retinal image registration, particularly for color fundus images, is a challenging yet essential task with diverse clinical applications. Existing registration methods for color fundus images typically rely on keypoints and descriptors for alignment; however, a significant limitation is their reliance on labeled data, which is particularly scarce in the medical domain. In this work, we present a novel unsupervised registration pipeline that entirely eliminates the need for labeled data. Our approach is based on the principle that locations with distinctive descriptors constitute reliable keypoints. This fully inverts the conventional state-of-the-art approach, conditioning the detector on the descriptor rather than the opposite. First, we propose an innovative descriptor learning method that operates without keypoint detection or any labels, generating descriptors for arbitrary locations in retinal images. Next, we introduce a novel, label-free keypoint detector network which works by estimating descriptor performance directly from the input image. We validate our method through a comprehensive evaluation on four hold-out datasets, demonstrating that our unsupervised descriptor outperforms state-of-the-art supervised descriptors and that our unsupervised detector significantly outperforms existing unsupervised detection methods. Finally, our full registration pipeline achieves performance comparable to the leading supervised methods, while not employing any labeled data. Additionally, the label-free nature and design of our method enable direct adaptation to other domains and modalities.

Unsupervised training of keypoint-agnostic descriptors for flexible retinal image registration

Current color fundus image registration approaches are limited, among other things, by the lack of labeled data, which is even more significant in the medical domain, motivating the use of unsupervised learning. Therefore, in this work, we develop a novel unsupervised descriptor learning method that does not rely on keypoint detection. This enables the resulting descriptor network to be agnostic to the keypoint detector used during the registration inference. To validate this approach, we perform an extensive and comprehensive comparison on the reference public retinal image registration dataset. Additionally, we test our method with multiple keypoint detectors of varied nature, even proposing some novel ones. Our results demonstrate that the proposed approach offers accurate registration, not incurring in any performance loss versus supervised methods. Additionally, it demonstrates accurate performance regardless of the keypoint detector used. Thus, this work represents a notable step towards leveraging unsupervised learning in the medical domain.

ConKeD++ -- Improving descriptor learning for retinal image registration: A comprehensive study of contrastive losses

Self-supervised contrastive learning has emerged as one of the most successful deep learning paradigms. In this regard, it has seen extensive use in image registration and, more recently, in the particular field of medical image registration. In this work, we propose to test and extend and improve a state-of-the-art framework for color fundus image registration, ConKeD. Using the ConKeD framework we test multiple loss functions, adapting them to the framework and the application domain. Furthermore, we evaluate our models using the standarized benchmark dataset FIRE as well as several datasets that have never been used before for color fundus registration, for which we are releasing the pairing data as well as a standardized evaluation approach. Our work demonstrates state-of-the-art performance across all datasets and metrics demonstrating several advantages over current SOTA color fundus registration methods

ConKeD: Multiview contrastive descriptor learning for keypoint-based retinal image registration

Retinal image registration is of utmost importance due to its wide applications in medical practice. In this context, we propose ConKeD, a novel deep learning approach to learn descriptors for retinal image registration. In contrast to current registration methods, our approach employs a novel multi-positive multi-negative contrastive learning strategy that enables the utilization of additional information from the available training samples. This makes it possible to learn high quality descriptors from limited training data. To train and evaluate ConKeD, we combine these descriptors with domain-specific keypoints, particularly blood vessel bifurcations and crossovers, that are detected using a deep neural network. Our experimental results demonstrate the benefits of the novel multi-positive multi-negative strategy, as it outperforms the widely used triplet loss technique (single-positive and single-negative) as well as the single-positive multi-negative alternative. Additionally, the combination of ConKeD with the domain-specific keypoints produces comparable results to the state-of-the-art methods for retinal image registration, while offering important advantages such as avoiding pre-processing, utilizing fewer training samples, and requiring fewer detected keypoints, among others. Therefore, ConKeD shows a promising potential towards facilitating the development and application of deep learning-based methods for retinal image registration.