Deep Learning Framework for Early Detection of Pancreatic Cancer Using Multi-Modal Medical Imaging Analysis

Pacreatic ductal adenocarcinoma (PDAC) remains one of the most lethal forms of cancer, with a five-year survival rate below 10% primarily due to late detection. This research develops and validates a deep learning framework for early PDAC detection through analysis of dual-modality imaging: autofluorescence and second harmonic generation (SHG). We analyzed 40 unique patient samples to create a specialized neural network capable of distinguishing between normal, fibrotic, and cancerous tissue. Our methodology evaluated six distinct deep learning architectures, comparing traditional Convolutional Neural Networks (CNNs) with modern Vision Transformers (ViTs). Through systematic experimentation, we identified and overcome significant challenges in medical image analysis, including limited dataset size and class imbalance. The final optimized framework, based on a modified ResNet architecture with frozen pre-trained layers and class-weighted training, achieved over 90% accuracy in cancer detection. This represents a significant improvement over current manual analysis methods an demonstrates potential for clinical deployment. This work establishes a robust pipeline for automated PDAC detection that can augment pathologists' capabilities while providing a foundation for future expansion to other cancer types. The developed methodology also offers valuable insights for applying deep learning to limited-size medical imaging datasets, a common challenge in clinical applications.

Transfer Learning for Microstructure Segmentation with CS-UNet: A Hybrid Algorithm with Transformer and CNN Encoders

Transfer learning improves the performance of deep learning models by initializing them with parameters pre-trained on larger datasets. Intuitively, transfer learning is more effective when pre-training is on the in-domain datasets. A recent study by NASA has demonstrated that the microstructure segmentation with encoder-decoder algorithms benefits more from CNN encoders pre-trained on microscopy images than from those pre-trained on natural images. However, CNN models only capture the local spatial relations in images. In recent years, attention networks such as Transformers are increasingly used in image analysis to capture the long-range relations between pixels. In this study, we compare the segmentation performance of Transformer and CNN models pre-trained on microscopy images with those pre-trained on natural images. Our result partially confirms the NASA study that the segmentation performance of out-of-distribution images (taken under different imaging and sample conditions) is significantly improved when pre-training on microscopy images. However, the performance gain for one-shot and few-shot learning is more modest with Transformers. We also find that for image segmentation, the combination of pre-trained Transformers and CNN encoders are consistently better than pre-trained CNN encoders alone. Our dataset (of about 50,000 images) combines the public portion of the NASA dataset with additional images we collected. Even with much less training data, our pre-trained models have significantly better performance for image segmentation. This result suggests that Transformers and CNN complement each other and when pre-trained on microscopy images, they are more beneficial to the downstream tasks.

Computer Vision Methods for the Microstructural Analysis of Materials: The State-of-the-art and Future Perspectives

Finding quantitative descriptors representing the microstructural features of a given material is an ongoing research area in the paradigm of Materials-by-Design. Historically, microstructural analysis mostly relies on qualitative descriptions. However, to build a robust and accurate process-structure-properties relationship, which is required for designing new advanced high-performance materials, the extraction of quantitative and meaningful statistical data from the microstructural analysis is a critical step. In recent years, computer vision (CV) methods, especially those which are centered around convolutional neural network (CNN) algorithms have shown promising results for this purpose. This review paper focuses on the state-of-the-art CNN-based techniques that have been applied to various multi-scale microstructural image analysis tasks, including classification, object detection, segmentation, feature extraction, and reconstruction. Additionally, we identified the main challenges with regard to the application of these methods to materials science research. Finally, we discussed some possible future directions of research in this area. In particular, we emphasized the application of transformer-based models and their capabilities to improve the microstructural analysis of materials.