Neural network representations contain structure beyond what was present in the training labels. For instance, representations of images that are visually or semantically similar tend to lie closer to each other than to dissimilar images, regardless of their labels. Clustering these representations can thus provide insights into dataset properties as well as the network internals. In this work, we study how the many design choices involved in neural network training affect the clusters formed in the hidden representations. To do so, we establish an evaluation setup based on the BREEDS hierarchy, for the task of subclass clustering after training models with only superclass information. We isolate the training dataset and architecture as important factors affecting clusterability. Datasets with labeled classes consisting of unrelated subclasses yield much better clusterability than those following a natural hierarchy. When using pretrained models to cluster representations on downstream datasets, models pretrained on subclass labels provide better clusterability than models pretrained on superclass labels, but only when there is a high degree of domain overlap between the pretraining and downstream data. Architecturally, we find that normalization strategies affect which layers yield the best clustering performance, and, surprisingly, Vision Transformers attain lower subclass clusterability than ResNets.
Orthogonal time frequency space (OTFS) is a promising modulation scheme for wireless communication in high-mobility scenarios. Recently, a reservoir computing (RC) based approach has been introduced for online subframe-based symbol detection in the OTFS system, where only a limited number of over-the-air (OTA) pilot symbols are utilized for training. However, this approach does not leverage the domain knowledge specific to the OTFS system. This paper introduces a novel two-dimensional RC (2D-RC) method that incorporates the structural knowledge of the OTFS system into the design for online symbol detection on a subframe basis. Specifically, as the channel response acts as a two-dimensional (2D) operation over the transmitted information symbols in the delay-Doppler (DD) domain, the 2D-RC is designed to have a 2D structure to equalize the channel. With the introduced architecture, the 2D-RC can benefit from the predictable channel representation in the DD domain. Moreover, unlike the previous work that requires multiple RCs to learn the channel feature, the 2D-RC only requires a single neural network for detection. Experimental results demonstrate the effectiveness of the 2D-RC approach across different OTFS system variants and modulation orders.
There is a considerable body of work on data cleaning which employs various principles to rectify erroneous data and transform a dirty dataset into a cleaner one. One of prevalent approaches is probabilistic methods, including Bayesian methods. However, existing probabilistic methods often assume a simplistic distribution (e.g., Gaussian distribution), which is frequently underfitted in practice, or they necessitate experts to provide a complex prior distribution (e.g., via a programming language). This requirement is both labor-intensive and costly, rendering these methods less suitable for real-world applications. In this paper, we propose BClean, a Bayesian Cleaning system that features automatic Bayesian network construction and user interaction. We recast the data cleaning problem as a Bayesian inference that fully exploits the relationships between attributes in the observed dataset and any prior information provided by users. To this end, we present an automatic Bayesian network construction method that extends a structure learning-based functional dependency discovery method with similarity functions to capture the relationships between attributes. Furthermore, our system allows users to modify the generated Bayesian network in order to specify prior information or correct inaccuracies identified by the automatic generation process. We also design an effective scoring model (called the compensative scoring model) necessary for the Bayesian inference. To enhance the efficiency of data cleaning, we propose several approximation strategies for the Bayesian inference, including graph partitioning, domain pruning, and pre-detection. By evaluating on both real-world and synthetic datasets, we demonstrate that BClean is capable of achieving an F-measure of up to 0.9 in data cleaning, outperforming existing Bayesian methods by 2% and other data cleaning methods by 15%.
Large language models (LLMs) are trained on web-scale corpora that inevitably include contradictory factual information from sources of varying reliability. In this paper, we propose measuring an LLM property called trusted source alignment (TSA): the model's propensity to align with content produced by trusted publishers in the face of uncertainty or controversy. We present FactCheckQA, a TSA evaluation dataset based on a corpus of fact checking articles. We describe a simple protocol for evaluating TSA and offer a detailed analysis of design considerations including response extraction, claim contextualization, and bias in prompt formulation. Applying the protocol to PaLM-2, we find that as we scale up the model size, the model performance on FactCheckQA improves from near-random to up to 80% balanced accuracy in aligning with trusted sources.
With the surge in available data from various modalities, there is a growing need to bridge the gap between different data types. In this work, we introduce a novel approach to learn cross-modal representations between image data and molecular representations for drug discovery. We propose EMM and IMM, two innovative loss functions built on top of CLIP that leverage weak supervision and cross sites replicates in High-Content Screening. Evaluating our model against known baseline on cross-modal retrieval, we show that our proposed approach allows to learn better representations and mitigate batch effect. In addition, we also present a preprocessing method for the JUMP-CP dataset that effectively reduce the required space from 85Tb to a mere usable 7Tb size, still retaining all perturbations and most of the information content.
Greenhouse production of fruits and vegetables in developed countries is challenged by labor 12 scarcity and high labor costs. Robots offer a good solution for sustainable and cost-effective 13 production. Acquiring accurate spatial information about relevant plant parts is vital for 14 successful robot operation. Robot perception in greenhouses is challenging due to variations in 15 plant appearance, viewpoints, and illumination. This paper proposes a keypoint-detection-based 16 method using data from an RGB-D camera to estimate the 3D pose of peduncle nodes, which 17 provides essential information to harvest the tomato bunches. 18 19 Specifically, this paper proposes a method that detects four anatomical landmarks in the color 20 image and then integrates 3D point-cloud information to determine the 3D pose. A 21 comprehensive evaluation was conducted in a commercial greenhouse to gain insight into the 22 performance of different parts of the method. The results showed: (1) high accuracy in object 23 detection, achieving an Average Precision (AP) of AP@0.5=0.96; (2) an average Percentage of 24 Detected Joints (PDJ) of the keypoints of PhDJ@0.2=94.31%; and (3) 3D pose estimation 25 accuracy with mean absolute errors (MAE) of 11.38o and 9.93o for the relative upper and lower 26 angles between the peduncle and main stem, respectively. Furthermore, the capability to handle 27 variations in viewpoint was investigated, demonstrating the method was robust to view changes. 28 However, canonical and higher views resulted in slightly higher performance compared to other 29 views. Although tomato was selected as a use case, the proposed method is also applicable to 30 other greenhouse crops like pepper.
Deep neural networks (DNNs) have improved NLP tasks significantly, but training and maintaining such networks could be costly. Model compression techniques, such as, knowledge distillation (KD), have been proposed to address the issue; however, the compression process could be lossy. Motivated by this, our work investigates how a distilled student model differs from its teacher, if the distillation process causes any information losses, and if the loss follows a specific pattern. Our experiments aim to shed light on the type of tasks might be less or more sensitive to KD by reporting data points on the contribution of different factors, such as the number of layers or attention heads. Results such as ours could be utilized when determining effective and efficient configurations to achieve optimal information transfers between larger (teacher) and smaller (student) models.
Humans are able to manipulate Deformable Linear Objects (DLOs) such as cables and wires, with little or no visual information, relying mostly on force sensing. In this work, we propose a reduced DLO model which enables such blind manipulation by keeping the object under tension. Further, an online model estimation procedure is also proposed. A set of elementary sliding and clipping manipulation primitives are defined based on our model. The combination of these primitives allows for more complex motions such as winding of a DLO. The model estimation and manipulation primitives are tested individually but also together in a real-world cable harness production task, using a dual-arm YuMi, thus demonstrating that force-based perception can be sufficient even for such a complex scenario.
Hospital information systems (HIS) have become an essential part of healthcare institutions and now incorporate prescribing support software. Prescription support software allows for structured information capture, which improves the safety, appropriateness and efficiency of prescriptions and reduces the number of adverse drug events (ADEs). However, such a system increases the amount of time physicians spend at a computer entering information instead of providing medical care. In addition, any new visiting clinician must learn to manage complex interfaces since each HIS has its own interfaces. In this paper, we present a natural language interface for e-prescribing software in the form of a spoken dialogue system accessible on a smartphone. This system allows prescribers to record their prescriptions verbally, a form of interaction closer to their usual practice. The system extracts the formal representation of the prescription ready to be checked by the prescribing software and uses the dialogue to request mandatory information, correct errors or warn of particular situations. Since, to the best of our knowledge, there is no existing voice-based prescription dialogue system, we present the system developed in a low-resource environment, focusing on dialogue modeling, semantic extraction and data augmentation. The system was evaluated in the wild with 55 participants. This evaluation showed that our system has an average prescription time of 66.15 seconds for physicians and 35.64 seconds for other experts, and a task success rate of 76\% for physicians and 72\% for other experts. All evaluation data were recorded and annotated to form PxCorpus, the first spoken drug prescription corpus that has been made fully available to the community (\url{https://doi.org/10.5281/zenodo.6524162}).
Symbiotic radio (SR) is a promising technique to support cellular Internet-of-Things (IoT) by forming a mutualistic relationship between IoT and cellular transmissions. In this paper, we propose a novel multi-user multi-IoT-device SR system to enable massive access in cellular IoT. In the considered system, the base station (BS) transmits information to multiple cellular users, and a number of IoT devices simultaneously backscatter their information to these users via the cellular signal. The cellular users jointly decode the information from the BS and IoT devices. Noting that the reflective links from the IoT devices can be regarded as the channel uncertainty of the direct links, we apply the robust design method to design the beamforming vectors at the BS. Specifically, the transmit power is minimized under the cellular transmission outage probability constraints and IoT transmission sum rate constraints. The algorithm based on semi-definite programming and difference-of-convex programming is proposed to solve the power minimization problem. Moreover, we consider a special case where each cellular user is associated with several adjacent IoT devices and propose a direction of arrival (DoA)-based transmit beamforming design approach. The DoA-based approach requires only the DoA and angular spread (AS) of the direct links instead of the instantaneous channel state information (CSI) of the reflective link channels, leading to a significant reduction in the channel feedback overhead. Simulation results have substantiated the multi-user multi-IoT-device SR system and the effectiveness of the proposed beamforming approaches. It is shown that the DoA-based beamforming approach achieves comparable performance as the CSI-based approach in the special case when the ASs are small.