Simple Domain Adaptation for Sparse Retrievers

In Information Retrieval, and more generally in Natural Language Processing, adapting models to specific domains is conducted through fine-tuning. Despite the successes achieved by this method and its versatility, the need for human-curated and labeled data makes it impractical to transfer to new tasks, domains, and/or languages when training data doesn't exist. Using the model without training (zero-shot) is another option that however suffers an effectiveness cost, especially in the case of first-stage retrievers. Numerous research directions have emerged to tackle these issues, most of them in the context of adapting to a task or a language. However, the literature is scarcer for domain (or topic) adaptation. In this paper, we address this issue of cross-topic discrepancy for a sparse first-stage retriever by transposing a method initially designed for language adaptation. By leveraging pre-training on the target data to learn domain-specific knowledge, this technique alleviates the need for annotated data and expands the scope of domain adaptation. Despite their relatively good generalization ability, we show that even sparse retrievers can benefit from our simple domain adaptation method.

Task-specific regularization loss towards model calibration for reliable lung cancer detection

Lung cancer is one of the significant causes of cancer-related deaths globally. Early detection and treatment improve the chances of survival. Traditionally CT scans have been used to extract the most significant lung infection information and diagnose cancer. This process is carried out manually by an expert radiologist. The imbalance in the radiologists-to-population ratio in a country like India implies significant work pressure on them and thus raises the need to automate a few of their responsibilities. The tendency of modern-day Deep Neural networks to make overconfident mistakes limit their usage to detect cancer. In this paper, we propose a new task-specific loss function to calibrate the neural network to reduce the risk of overconfident mistakes. We use the state-of-the-art Multi-class Difference in Confidence and Accuracy (MDCA) loss in conjunction with the proposed task-specific loss function to achieve the same. We also integrate post-hoc calibration by performing temperature scaling on top of the train-time calibrated model. We demonstrate 5.98% improvement in the Expected Calibration Error (ECE) and a 17.9% improvement in Maximum Calibration Error (MCE) as compared to the best-performing SOTA algorithm.

Taec: a Manually annotated text dataset for trait and phenotype extraction and entity linking in wheat breeding literature

Wheat varieties show a large diversity of traits and phenotypes. Linking them to genetic variability is essential for shorter and more efficient wheat breeding programs. Newly desirable wheat variety traits include disease resistance to reduce pesticide use, adaptation to climate change, resistance to heat and drought stresses, or low gluten content of grains. Wheat breeding experiments are documented by a large body of scientific literature and observational data obtained in-field and under controlled conditions. The cross-referencing of complementary information from the literature and observational data is essential to the study of the genotype-phenotype relationship and to the improvement of wheat selection. The scientific literature on genetic marker-assisted selection describes much information about the genotype-phenotype relationship. However, the variety of expressions used to refer to traits and phenotype values in scientific articles is a hinder to finding information and cross-referencing it. When trained adequately by annotated examples, recent text mining methods perform highly in named entity recognition and linking in the scientific domain. While several corpora contain annotations of human and animal phenotypes, currently, no corpus is available for training and evaluating named entity recognition and entity-linking methods in plant phenotype literature. The Triticum aestivum trait Corpus is a new gold standard for traits and phenotypes of wheat. It consists of 540 PubMed references fully annotated for trait, phenotype, and species named entities using the Wheat Trait and Phenotype Ontology and the species taxonomy of the National Center for Biotechnology Information. A study of the performance of tools trained on the Triticum aestivum trait Corpus shows that the corpus is suitable for the training and evaluation of named entity recognition and linking.

NODI: Out-Of-Distribution Detection with Noise from Diffusion

Out-of-distribution (OOD) detection is a crucial part of deploying machine learning models safely. It has been extensively studied with a plethora of methods developed in the literature. This problem is tackled with an OOD score computation, however, previous methods compute the OOD scores with limited usage of the in-distribution dataset. For instance, the OOD scores are computed with information from a small portion of the in-distribution data. Furthermore, these methods encode images with a neural image encoder. The robustness of these methods is rarely checked with respect to image encoders of different training methods and architectures. In this work, we introduce the diffusion process into the OOD task. The diffusion model integrates information on the whole training set into the predicted noise vectors. What's more, we deduce a closed-form solution for the noise vector (stable point). Then the noise vector is converted into our OOD score, we test both the deep model predicted noise vector and the closed-form noise vector on the OOD benchmarks \cite{openood}. Our method outperforms previous OOD methods across all types of image encoders (Table. \ref{main}). A $3.5\%$ performance gain is achieved with the MAE-based image encoder. Moreover, we studied the robustness of OOD methods by applying different types of image encoders. Some OOD methods failed to generalize well when switching image encoders from ResNet to Vision Transformers, our method performs exhibits good robustness with all the image encoders.

BOK-VQA: Bilingual Outside Knowledge-based Visual Question Answering via Graph Representation Pretraining

The current research direction in generative models, such as the recently developed GPT4, aims to find relevant knowledge information for multimodal and multilingual inputs to provide answers. Under these research circumstances, the demand for multilingual evaluation of visual question answering (VQA) tasks, a representative task of multimodal systems, has increased. Accordingly, we propose a bilingual outside-knowledge VQA (BOK-VQA) dataset in this study that can be extended to multilingualism. The proposed data include 17K images, 17K question-answer pairs for both Korean and English and 280K instances of knowledge information related to question-answer content. We also present a framework that can effectively inject knowledge information into a VQA system by pretraining the knowledge information of BOK-VQA data in the form of graph embeddings. Finally, through in-depth analysis, we demonstrated the actual effect of the knowledge information contained in the constructed training data on VQA.

Combining Cloud and Mobile Computing for Machine Learning

Although the computing power of mobile devices is increasing, machine learning models are also growing in size. This trend creates problems for mobile devices due to limitations like their memory capacity and battery life. While many services, like ChatGPT and Midjourney, run all the inferences in the cloud, we believe a flexible and fine-grained task distribution is more desirable. In this work, we consider model segmentation as a solution to improving the user experience, dividing the computation between mobile devices and the cloud in a way that offloads the compute-heavy portion of the model while minimizing the data transfer required. We show that the division not only reduces the wait time for users but can also be fine-tuned to optimize the workloads of the cloud. To achieve that, we design a scheduler that collects information about network quality, client device capability, and job requirements, making decisions to achieve consistent performance across a range of devices while reducing the work the cloud needs to perform.

Contrastive Learning and Cycle Consistency-based Transductive Transfer Learning for Target Annotation

Annotating automatic target recognition (ATR) is a highly challenging task, primarily due to the unavailability of labeled data in the target domain. Hence, it is essential to construct an optimal target domain classifier by utilizing the labeled information of the source domain images. The transductive transfer learning (TTL) method that incorporates a CycleGAN-based unpaired domain translation network has been previously proposed in the literature for effective ATR annotation. Although this method demonstrates great potential for ATR, it severely suffers from lower annotation performance, higher Fr\'echet Inception Distance (FID) score, and the presence of visual artifacts in the synthetic images. To address these issues, we propose a hybrid contrastive learning base unpaired domain translation (H-CUT) network that achieves a significantly lower FID score. It incorporates both attention and entropy to emphasize the domain-specific region, a noisy feature mixup module to generate high variational synthetic negative patches, and a modulated noise contrastive estimation (MoNCE) loss to reweight all negative patches using optimal transport for better performance. Our proposed contrastive learning and cycle-consistency-based TTL (C3TTL) framework consists of two H-CUT networks and two classifiers. It simultaneously optimizes cycle-consistency, MoNCE, and identity losses. In C3TTL, two H-CUT networks have been employed through a bijection mapping to feed the reconstructed source domain images into a pretrained classifier to guide the optimal target domain classifier. Extensive experimental analysis conducted on three ATR datasets demonstrates that the proposed C3TTL method is effective in annotating civilian and military vehicles, as well as ship targets.

Semi-supervised segmentation of land cover images using nonlinear canonical correlation analysis with multiple features and t-SNE

Image segmentation is a clustering task whereby each pixel is assigned a cluster label. Remote sensing data usually consists of multiple bands of spectral images in which there exist semantically meaningful land cover subregions, co-registered with other source data such as LIDAR (LIght Detection And Ranging) data, where available. This suggests that, in order to account for spatial correlation between pixels, a feature vector associated with each pixel may be a vectorized tensor representing the multiple bands and a local patch as appropriate. Similarly, multiple types of texture features based on a pixel's local patch would also be beneficial for encoding locally statistical information and spatial variations, without necessarily labelling pixel-wise a large amount of ground truth, then training a supervised model, which is sometimes impractical. In this work, by resorting to label only a small quantity of pixels, a new semi-supervised segmentation approach is proposed. Initially, over all pixels, an image data matrix is created in high dimensional feature space. Then, t-SNE projects the high dimensional data onto 3D embedding. By using radial basis functions as input features, which use the labelled data samples as centres, to pair with the output class labels, a modified canonical correlation analysis algorithm, referred to as RBF-CCA, is introduced which learns the associated projection matrix via the small labelled data set. The associated canonical variables, obtained for the full image, are applied by k-means clustering algorithm. The proposed semi-supervised RBF-CCA algorithm has been implemented on several remotely sensed multispectral images, demonstrating excellent segmentation results.

Acoustic characterization of speech rhythm: going beyond metrics with recurrent neural networks

Languages have long been described according to their perceived rhythmic attributes. The associated typologies are of interest in psycholinguistics as they partly predict newborns' abilities to discriminate between languages and provide insights into how adult listeners process non-native languages. Despite the relative success of rhythm metrics in supporting the existence of linguistic rhythmic classes, quantitative studies have yet to capture the full complexity of temporal regularities associated with speech rhythm. We argue that deep learning offers a powerful pattern-recognition approach to advance the characterization of the acoustic bases of speech rhythm. To explore this hypothesis, we trained a medium-sized recurrent neural network on a language identification task over a large database of speech recordings in 21 languages. The network had access to the amplitude envelopes and a variable identifying the voiced segments, assuming that this signal would poorly convey phonetic information but preserve prosodic features. The network was able to identify the language of 10-second recordings in 40% of the cases, and the language was in the top-3 guesses in two-thirds of the cases. Visualization methods show that representations built from the network activations are consistent with speech rhythm typologies, although the resulting maps are more complex than two separated clusters between stress and syllable-timed languages. We further analyzed the model by identifying correlations between network activations and known speech rhythm metrics. The findings illustrate the potential of deep learning tools to advance our understanding of speech rhythm through the identification and exploration of linguistically relevant acoustic feature spaces.

Augmenting Prototype Network with TransMix for Few-shot Hyperspectral Image Classification

Few-shot hyperspectral image classification aims to identify the classes of each pixel in the images by only marking few of these pixels. And in order to obtain the spatial-spectral joint features of each pixel, the fixed-size patches centering around each pixel are often used for classification. However, observing the classification results of existing methods, we found that boundary patches corresponding to the pixels which are located at the boundary of the objects in the hyperspectral images, are hard to classify. These boundary patchs are mixed with multi-class spectral information. Inspired by this, we propose to augment the prototype network with TransMix for few-shot hyperspectrial image classification(APNT). While taking the prototype network as the backbone, it adopts the transformer as feature extractor to learn the pixel-to-pixel relation and pay different attentions to different pixels. At the same time, instead of directly using the patches which are cut from the hyperspectral images for training, it randomly mixs up two patches to imitate the boundary patches and uses the synthetic patches to train the model, with the aim to enlarge the number of hard training samples and enhance their diversity. And by following the data agumentation technique TransMix, the attention returned by the transformer is also used to mix up the labels of two patches to generate better labels for synthetic patches. Compared with existing methods, the proposed method has demonstrated sate of the art performance and better robustness for few-shot hyperspectral image classification in our experiments.