Transformers are the dominant architecture for sequence modeling, but there is growing interest in models that use a fixed-size latent state that does not depend on the sequence length, which we refer to as "generalized state space models" (GSSMs). In this paper we show that while GSSMs are promising in terms of inference-time efficiency, they are limited compared to transformer models on tasks that require copying from the input context. We start with a theoretical analysis of the simple task of string copying and prove that a two layer transformer can copy strings of exponential length while GSSMs are fundamentally limited by their fixed-size latent state. Empirically, we find that transformers outperform GSSMs in terms of efficiency and generalization on synthetic tasks that require copying the context. Finally, we evaluate pretrained large language models and find that transformer models dramatically outperform state space models at copying and retrieving information from context. Taken together, these results suggest a fundamental gap between transformers and GSSMs on tasks of practical interest.
The convolutional neural network-based methods have become more and more popular for medical image segmentation due to their outstanding performance. However, they struggle with capturing long-range dependencies, which are essential for accurately modeling global contextual correlations. Thanks to the ability to model long-range dependencies by expanding the receptive field, the transformer-based methods have gained prominence. Inspired by this, we propose an advanced 2D feature extraction method by combining the convolutional neural network and Transformer architectures. More specifically, we introduce a parallelized encoder structure, where one branch uses ResNet to extract local information from images, while the other branch uses Transformer to extract global information. Furthermore, we integrate pyramid structures into the Transformer to extract global information at varying resolutions, especially in intensive prediction tasks. To efficiently utilize the different information in the parallelized encoder at the decoder stage, we use a channel attention module to merge the features of the encoder and propagate them through skip connections and bottlenecks. Intensive numerical experiments are performed on both aortic vessel tree, cardiac, and multi-organ datasets. By comparing with state-of-the-art medical image segmentation methods, our method is shown with better segmentation accuracy, especially on small organs. The code is publicly available on https://github.com/HongkunSun/ParaTransCNN.
GNNs are widely used to solve various tasks including node classification and link prediction. Most of the GNN architectures assume the initial embedding to be random or generated from popular distributions. These initial embeddings require multiple layers of transformation to converge into a meaningful latent representation. While number of layers allow accumulation of larger neighbourhood of a node it also introduce the problem of over-smoothing. In addition, GNNs are inept at representing structural information. For example, the output embedding of a node does not capture its triangles participation. In this paper, we presented a novel feature extraction methodology GraphViz2Vec that can capture the structural information of a node's local neighbourhood to create meaningful initial embeddings for a GNN model. These initial embeddings helps existing models achieve state-of-the-art results in various classification tasks. Further, these initial embeddings help the model to produce desired results with only two layers which in turn reduce the problem of over-smoothing. The initial encoding of a node is obtained from an image classification model trained on multiple energy diagrams of its local neighbourhood. These energy diagrams are generated with the induced sub-graph of the nodes traversed by multiple random walks. The generated encodings increase the performance of existing models on classification tasks (with a mean increase of $4.65\%$ and $2.58\%$ for the node and link classification tasks, respectively), with some models achieving state-of-the-art results.
Whilst spectral Graph Neural Networks (GNNs) are theoretically well-founded in the spectral domain, their practical reliance on polynomial approximation implies a profound linkage to the spatial domain. As previous studies rarely examine spectral GNNs from the spatial perspective, their spatial-domain interpretability remains elusive, e.g., what information is essentially encoded by spectral GNNs in the spatial domain? In this paper, to answer this question, we establish a theoretical connection between spectral filtering and spatial aggregation, unveiling an intrinsic interaction that spectral filtering implicitly leads the original graph to an adapted new graph, explicitly computed for spatial aggregation. Both theoretical and empirical investigations reveal that the adapted new graph not only exhibits non-locality but also accommodates signed edge weights to reflect label consistency among nodes. These findings thus highlight the interpretable role of spectral GNNs in the spatial domain and inspire us to rethink graph spectral filters beyond the fixed-order polynomials, which neglect global information. Built upon the theoretical findings, we revisit the state-of-the-art spectral GNNs and propose a novel Spatially Adaptive Filtering (SAF) framework, which leverages the adapted new graph by spectral filtering for an auxiliary non-local aggregation. Notably, our proposed SAF comprehensively models both node similarity and dissimilarity from a global perspective, therefore alleviating persistent deficiencies of GNNs related to long-range dependencies and graph heterophily. Extensive experiments over 13 node classification benchmarks demonstrate the superiority of our proposed framework to the state-of-the-art models.
This work focuses on wideband intelligent reflecting surface (IRS)-aided multiuser MIMO systems. One of the major challenges of this scenario is the joint design of the frequency-dependent base station (BS) precoder and user filters, and the IRS phase-shift matrix which is frequency flat and common to all the users. In addition, we consider that the channel state information (CSI) is imperfect at both the transmitter and the receivers. A statistical model for the imperfect CSI is developed and exploited for the system design. A minimum mean square error (MMSE) approach is followed to determine the IRS phase-shift matrix, the transmit precoders, and the receiving filters. The broadcast (BC)- multiple access channel (MAC) duality is used to solve the optimization problem following an alternating minimization approach. Numerical results show that the proposed approach leads to substantial performance gains with respect to baseline strategies that neglect the inter-user interference and do not optimize the IRS phase-shift matrix. Further performance gains are obtained when incorporating into the system design the statistical information of the channel estimation errors.
We introduce the new task of clinically meaningful summarisation of social media user timelines, appropriate for mental health monitoring. We develop a novel approach for unsupervised abstractive summarisation that produces a two-layer summary consisting of both high-level information, covering aspects useful to clinical experts, as well as accompanying time sensitive evidence from a user's social media timeline. A key methodological novelty comes from the timeline summarisation component based on a version of hierarchical variational autoencoder (VAE) adapted to represent long texts and guided by LLM-annotated key phrases. The resulting timeline summary is input into a LLM (LLaMA-2) to produce the final summary containing both the high level information, obtained through instruction prompting, as well as corresponding evidence from the user's timeline. We assess the summaries generated by our novel architecture via automatic evaluation against expert written summaries and via human evaluation with clinical experts, showing that timeline summarisation by TH-VAE results in logically coherent summaries rich in clinical utility and superior to LLM-only approaches in capturing changes over time.
In this paper, we introduce a new multimodal dataset in the medical field of hypertensive intracerebral hemorrhage(HICH), called as HICH-IT, which includes both textual information and head CT images. This dataset is designed to enhance the accuracy of artificial intelligence in the diagnosis and treatment of HICH. This dataset, built upon the foundation of standard text and image data, incorporates specific annotations within the text data, extracting key content from the text information, and categorizes the annotation content of imaging data into four types: brain midline, hematoma, left cerebral ventricle, and right cerebral ventricle. HICH-IT aims to be a foundational dataset for feature learning in image segmentation tasks and named entity recognition. To further understand the dataset, we have trained deep learning algorithms to observe the performance. The pretrained models have been released at both www.daip.club and github.com/Deep-AI-Application-DAIP. The dataset has been uploaded to https://github.com/CYBUS123456/HICH-IT-Datasets. Index Terms-HICH, Deep learning, Intraparenchymal hemorrhage, named entity recognition, novel dataset
In the context of communication networks, digital twin technology provides a means to replicate the radio frequency (RF) propagation environment as well as the system behaviour, allowing for a way to optimize the performance of a deployed system based on simulations. One of the key challenges in the application of Digital Twin technology to mmWave systems is the prevalent channel simulators' stringent requirements on the accuracy of the 3D Digital Twin, reducing the feasibility of the technology in real applications. We propose a practical Digital Twin creation pipeline and a channel simulator, that relies only on a single mounted camera and position information. We demonstrate the performance benefits compared to methods that do not explicitly model the 3D environment, on downstream sub-tasks in beam acquisition, using the real-world dataset of the DeepSense6G challenge
[$^{18}$F]fluorodeoxyglucose (FDG) positron emission tomography (PET) has emerged as a crucial tool in identifying the epileptic focus, especially in cases where magnetic resonance imaging (MRI) diagnosis yields indeterminate results. FDG PET can provide the metabolic information of glucose and help identify abnormal areas that are not easily found through MRI. However, the effectiveness of FDG PET-based assessment and diagnosis depends on the selection of a healthy control group. The healthy control group typically consists of healthy individuals similar to epilepsy patients in terms of age, gender, and other aspects for providing normal FDG PET data, which will be used as a reference for enhancing the accuracy and reliability of the epilepsy diagnosis. However, significant challenges arise when a healthy PET control group is unattainable. Yaakub \emph{et al.} have previously introduced a Pix2PixGAN-based method for MRI to PET translation. This method used paired MRI and FDG PET scans from healthy individuals for training, and produced pseudo normal FDG PET images from patient MRIs that are subsequently used for lesion detection. However, this approach requires a large amount of high-quality, paired MRI and PET images from healthy control subjects, which may not always be available. In this study, we investigated unsupervised learning methods for unpaired MRI to PET translation for generating pseudo normal FDG PET for epileptic focus localization. Two deep learning methods, CycleGAN and SynDiff, were employed, and we found that diffusion-based method achieved improved performance in accurately localizing the epileptic focus.
Real-world text can be damaged by corrosion issues caused by environmental or human factors, which hinder the preservation of the complete styles of texts, e.g., texture and structure. These corrosion issues, such as graffiti signs and incomplete signatures, bring difficulties in understanding the texts, thereby posing significant challenges to downstream applications, e.g., scene text recognition and signature identification. Notably, current inpainting techniques often fail to adequately address this problem and have difficulties restoring accurate text images along with reasonable and consistent styles. Formulating this as an open problem of text image inpainting, this paper aims to build a benchmark to facilitate its study. In doing so, we establish two specific text inpainting datasets which contain scene text images and handwritten text images, respectively. Each of them includes images revamped by real-life and synthetic datasets, featuring pairs of original images, corrupted images, and other assistant information. On top of the datasets, we further develop a novel neural framework, Global Structure-guided Diffusion Model (GSDM), as a potential solution. Leveraging the global structure of the text as a prior, the proposed GSDM develops an efficient diffusion model to recover clean texts. The efficacy of our approach is demonstrated by thorough empirical study, including a substantial boost in both recognition accuracy and image quality. These findings not only highlight the effectiveness of our method but also underscore its potential to enhance the broader field of text image understanding and processing. Code and datasets are available at: https://github.com/blackprotoss/GSDM.