Semantic communication, an intelligent communication paradigm that aims to transmit useful information in the semantic domain, is facilitated by deep learning techniques. Although robust semantic features can be learned and transmitted in an analog fashion, it poses new challenges to hardware, protocol, and encryption. In this paper, we propose a digital semantic communication system, which consists of an encoding network deployed on a resource-limited device and a decoding network deployed at the edge. To acquire better semantic representation for digital transmission, a novel non-linear quantization module is proposed with the trainable quantization levels that efficiently quantifies semantic features. Additionally, structured pruning by a sparse scaling vector is incorporated to reduce the dimension of the transmitted features. We also introduce a semantic learning loss (SLL) function to reduce semantic error. To adapt to various channel conditions and inputs under constraints of communication and computing resources, a policy network is designed to adaptively choose the split point and the dimension of the transmitted semantic features. Experiments using the CIFAR-10 dataset for image classification are employed to evaluate the proposed digital semantic communication network, and ablation studies are conducted to assess the proposed modules including the quantization module, structured pruning and SLL.
We present READMem (Robust Embedding Association for a Diverse Memory), a modular framework for semi-automatic video object segmentation (sVOS) methods designed to handle unconstrained videos. Contemporary sVOS works typically aggregate video frames in an ever-expanding memory, demanding high hardware resources for long-term applications. To mitigate memory requirements and prevent near object duplicates (caused by information of adjacent frames), previous methods introduce a hyper-parameter that controls the frequency of frames eligible to be stored. This parameter has to be adjusted according to concrete video properties (such as rapidity of appearance changes and video length) and does not generalize well. Instead, we integrate the embedding of a new frame into the memory only if it increases the diversity of the memory content. Furthermore, we propose a robust association of the embeddings stored in the memory with query embeddings during the update process. Our approach avoids the accumulation of redundant data, allowing us in return, to restrict the memory size and prevent extreme memory demands in long videos. We extend popular sVOS baselines with READMem, which previously showed limited performance on long videos. Our approach achieves competitive results on the Long-time Video dataset (LV1) while not hindering performance on short sequences. Our code is publicly available.
Modeling multi-party conversations (MPCs) with graph neural networks has been proven effective at capturing complicated and graphical information flows. However, existing methods rely heavily on the necessary addressee labels and can only be applied to an ideal setting where each utterance must be tagged with an addressee label. To study the scarcity of addressee labels which is a common issue in MPCs, we propose MADNet that maximizes addressee deduction expectation in heterogeneous graph neural networks for MPC generation. Given an MPC with a few addressee labels missing, existing methods fail to build a consecutively connected conversation graph, but only a few separate conversation fragments instead. To ensure message passing between these conversation fragments, four additional types of latent edges are designed to complete a fully-connected graph. Besides, to optimize the edge-type-dependent message passing for those utterances without addressee labels, an Expectation-Maximization-based method that iteratively generates silver addressee labels (E step), and optimizes the quality of generated responses (M step), is designed. Experimental results on two Ubuntu IRC channel benchmarks show that MADNet outperforms various baseline models on the task of MPC generation, especially under the more common and challenging setting where part of addressee labels are missing.
Semantic segmentation of drone images is critical to many aerial vision tasks as it provides essential semantic details that can compensate for the lack of depth information from monocular cameras. However, maintaining high accuracy of semantic segmentation models for drones requires diverse, large-scale, and high-resolution datasets, which are rare in the field of aerial image processing. Existing datasets are typically small and focus primarily on urban scenes, neglecting rural and industrial areas. Models trained on such datasets are not sufficiently equipped to handle the variety of inputs seen in drone imagery. In the VDD-Varied Drone Dataset, we offer a large-scale and densely labeled dataset comprising 400 high-resolution images that feature carefully chosen scenes, camera angles, and varied light and weather conditions. Furthermore, we have adapted existing drone datasets to conform to our annotation standards and integrated them with VDD to create a dataset 1.5 times the size of fine annotation of Cityscapes. We have developed a novel DeepLabT model, which combines CNN and Transformer backbones, to provide a reliable baseline for semantic segmentation in drone imagery. Our experiments indicate that DeepLabT performs admirably on VDD and other drone datasets. We expect that our dataset will generate considerable interest in drone image segmentation and serve as a foundation for other drone vision tasks. VDD is freely available on our website at https://vddvdd.com .
Introduction: The COVID-19 pandemic highlighted the importance of making epidemiological data and scientific insights easily accessible and explorable for public health agencies, the general public, and researchers. State-of-the-art approaches for sharing data and insights included regularly updated reports and web dashboards. However, they face a trade-off between the simplicity and flexibility of data exploration. With the capabilities of recent large language models (LLMs) such as GPT-4, this trade-off can be overcome. Results: We developed the chatbot "GenSpectrum Chat" (https://cov-spectrum.org/chat) which uses GPT-4 as the underlying large language model (LLM) to explore SARS-CoV-2 genomic sequencing data. Out of 500 inputs from real-world users, the chatbot provided a correct answer for 453 prompts; an incorrect answer for 13 prompts, and no answer although the question was within scope for 34 prompts. We also tested the chatbot with inputs from 10 different languages, and despite being provided solely with English instructions and examples, it successfully processed prompts in all tested languages. Conclusion: LLMs enable new ways of interacting with information systems. In the field of public health, GenSpectrum Chat can facilitate the analysis of real-time pathogen genomic data. With our chatbot supporting interactive exploration in different languages, we envision quick and direct access to the latest evidence for policymakers around the world.
Benchmarking and co-design are essential for driving optimizations and innovation around ML models, ML software, and next-generation hardware. Full workload benchmarks, e.g. MLPerf, play an essential role in enabling fair comparison across different software and hardware stacks especially once systems are fully designed and deployed. However, the pace of AI innovation demands a more agile methodology to benchmark creation and usage by simulators and emulators for future system co-design. We propose Chakra, an open graph schema for standardizing workload specification capturing key operations and dependencies, also known as Execution Trace (ET). In addition, we propose a complementary set of tools/capabilities to enable collection, generation, and adoption of Chakra ETs by a wide range of simulators, emulators, and benchmarks. For instance, we use generative AI models to learn latent statistical properties across thousands of Chakra ETs and use these models to synthesize Chakra ETs. These synthetic ETs can obfuscate key proprietary information and also target future what-if scenarios. As an example, we demonstrate an end-to-end proof-of-concept that converts PyTorch ETs to Chakra ETs and uses this to drive an open-source training system simulator (ASTRA-sim). Our end-goal is to build a vibrant industry-wide ecosystem of agile benchmarks and tools to drive future AI system co-design.
Biogenic Volatile Organic Compounds (BVOCs) emitted from the terrestrial ecosystem into the Earth's atmosphere are an important component of atmospheric chemistry. Due to the scarcity of measurement, a reliable enhancement of BVOCs emission maps can aid in providing denser data for atmospheric chemical, climate, and air quality models. In this work, we propose a strategy to super-resolve coarse BVOC emission maps by simultaneously exploiting the contributions of different compounds. To this purpose, we first accurately investigate the spatial inter-connections between several BVOC species. Then, we exploit the found similarities to build a Multi-Image Super-Resolution (MISR) system, in which a number of emission maps associated with diverse compounds are aggregated to boost Super-Resolution (SR) performance. We compare different configurations regarding the species and the number of joined BVOCs. Our experimental results show that incorporating BVOCs' relationship into the process can substantially improve the accuracy of the super-resolved maps. Interestingly, the best results are achieved when we aggregate the emission maps of strongly uncorrelated compounds. This peculiarity seems to confirm what was already guessed for other data-domains, i.e., joined uncorrelated information are more helpful than correlated ones to boost MISR performance. Nonetheless, the proposed work represents the first attempt in SR of BVOC emissions through the fusion of multiple different compounds.
This paper presents advancements in automated early-stage prediction of the success of reprogramming human induced pluripotent stem cells (iPSCs) as a potential source for regenerative cell therapies.The minuscule success rate of iPSC-reprogramming of around $ 0.01% $ to $ 0.1% $ makes it labor-intensive, time-consuming, and exorbitantly expensive to generate a stable iPSC line. Since that requires culturing of millions of cells and intense biological scrutiny of multiple clones to identify a single optimal clone. The ability to reliably predict which cells are likely to establish as an optimal iPSC line at an early stage of pluripotency would therefore be ground-breaking in rendering this a practical and cost-effective approach to personalized medicine. Temporal information about changes in cellular appearance over time is crucial for predicting its future growth outcomes. In order to generate this data, we first performed continuous time-lapse imaging of iPSCs in culture using an ultra-high resolution microscope. We then annotated the locations and identities of cells in late-stage images where reliable manual identification is possible. Next, we propagated these labels backwards in time using a semi-automated tracking system to obtain labels for early stages of growth. Finally, we used this data to train deep neural networks to perform automatic cell segmentation and classification. Our code and data are available at https://github.com/abhineet123/ipsc_prediction.
Effectively representing medical concepts and patients is important for healthcare analytical applications. Representing medical concepts for healthcare analytical tasks requires incorporating medical domain knowledge and prior information from patient description data. Current methods, such as feature engineering and mapping medical concepts to standardized terminologies, have limitations in capturing the dynamic patterns from patient description data. Other embedding-based methods have difficulties in incorporating important medical domain knowledge and often require a large amount of training data, which may not be feasible for most healthcare systems. Our proposed framework, MD-Manifold, introduces a novel approach to medical concept and patient representation. It includes a new data augmentation approach, concept distance metric, and patient-patient network to incorporate crucial medical domain knowledge and prior data information. It then adapts manifold learning methods to generate medical concept-level representations that accurately reflect medical knowledge and patient-level representations that clearly identify heterogeneous patient cohorts. MD-Manifold also outperforms other state-of-the-art techniques in various downstream healthcare analytical tasks. Our work has significant implications in information systems research in representation learning, knowledge-driven machine learning, and using design science as middle-ground frameworks for downstream explorative and predictive analyses. Practically, MD-Manifold has the potential to create effective and generalizable representations of medical concepts and patients by incorporating medical domain knowledge and prior data information. It enables deeper insights into medical data and facilitates the development of new analytical applications for better healthcare outcomes.
Implicit Discourse Relation Recognition (IDRR) is a sophisticated and challenging task to recognize the discourse relations between the arguments with the absence of discourse connectives. The sense labels for each discourse relation follow a hierarchical classification scheme in the annotation process (Prasad et al., 2008), forming a hierarchy structure. Most existing works do not well incorporate the hierarchy structure but focus on the syntax features and the prior knowledge of connectives in the manner of pure text classification. We argue that it is more effective to predict the paths inside the hierarchical tree (e.g., "Comparison -> Contrast -> however") rather than flat labels (e.g., Contrast) or connectives (e.g., however). We propose a prompt-based path prediction method to utilize the interactive information and intrinsic senses among the hierarchy in IDRR. This is the first work that injects such structure information into pre-trained language models via prompt tuning, and the performance of our solution shows significant and consistent improvement against competitive baselines.