The isometric mapping method employs the shortest path algorithm to estimate the Euclidean distance between points on High dimensional (HD) manifolds. This may not be sufficient for weakly uniformed HD data as it could lead to overestimating distances between far neighboring points, resulting in inconsistencies between the intrinsic (local) and extrinsic (global) distances during the projection. To address this issue, we modify the shortest path algorithm by adding a novel constraint inspired by the Parzen-Rosenblatt (PR) window, which helps to maintain the uniformity of the constructed shortest-path graph in Isomap. Multiple imaging datasets overall of 72,236 cases, 70,000 MINST data, 1596 from multiple Chest-XRay pneumonia datasets, and three NSCLC CT/PET datasets with a total of 640 lung cancer patients, were used to benchmark and validate PR-Isomap. 431 imaging biomarkers were extracted from each modality. Our results indicate that PR-Isomap projects HD attributes into a lower-dimensional (LD) space while preserving information, visualized by the MNIST dataset indicating the maintaining local and global distances. PR-Isomap achieved the highest comparative accuracies of 80.9% (STD:5.8) for pneumonia and 78.5% (STD:4.4), 88.4% (STD:1.4), and 61.4% (STD:11.4) for three NSCLC datasets, with a confidence interval of 95% for outcome prediction. Similarly, the multivariate Cox model showed higher overall survival, measured with c-statistics and log-likelihood test, of PR-Isomap compared to other dimensionality reduction methods. Kaplan Meier survival curve also signifies the notable ability of PR-Isomap to distinguish between high-risk and low-risk patients using multimodal imaging biomarkers preserving HD imaging characteristics for precision medicine.
Architectural Knowledge Management (AKM) involves the organized handling of information related to architectural decisions and design within a project or organization. An essential artifact of AKM is the Architecture Decision Records (ADR), which documents key design decisions. ADRs are documents that capture decision context, decision made and various aspects related to a design decision, thereby promoting transparency, collaboration, and understanding. Despite their benefits, ADR adoption in software development has been slow due to challenges like time constraints and inconsistent uptake. Recent advancements in Large Language Models (LLMs) may help bridge this adoption gap by facilitating ADR generation. However, the effectiveness of LLM for ADR generation or understanding is something that has not been explored. To this end, in this work, we perform an exploratory study that aims to investigate the feasibility of using LLM for the generation of ADRs given the decision context. In our exploratory study, we utilize GPT and T5-based models with 0-shot, few-shot, and fine-tuning approaches to generate the Decision of an ADR given its Context. Our results indicate that in a 0-shot setting, state-of-the-art models such as GPT-4 generate relevant and accurate Design Decisions, although they fall short of human-level performance. Additionally, we observe that more cost-effective models like GPT-3.5 can achieve similar outcomes in a few-shot setting, and smaller models such as Flan-T5 can yield comparable results after fine-tuning. To conclude, this exploratory study suggests that LLM can generate Design Decisions, but further research is required to attain human-level generation and establish standardized widespread adoption.
While subword tokenizers such as BPE and WordPiece are typically used to build vocabularies for NLP models, the method of decoding text into a sequence of tokens from these vocabularies is often left unspecified, or ill-suited to the method in which they were constructed. We provide a controlled analysis of seven tokenizer inference methods across four different algorithms and three vocabulary sizes, performed on a novel intrinsic evaluation suite we curated for English, combining measures rooted in morphology, cognition, and information theory. We show that for the most commonly used tokenizers, greedy inference performs surprisingly well; and that SaGe, a recently-introduced contextually-informed tokenizer, outperforms all others on morphological alignment.
In its most basic form, a Stackelberg game is a two-player game in which a leader commits to a (mixed) strategy, and a follower best-responds. Stackelberg games are perhaps one of the biggest success stories of algorithmic game theory over the last decade, as algorithms for playing in Stackelberg games have been deployed in many real-world domains including airport security, anti-poaching efforts, and cyber-crime prevention. However, these algorithms often fail to take into consideration the additional information available to each player (e.g. traffic patterns, weather conditions, network congestion), a salient feature of reality which may significantly affect both players' optimal strategies. We formalize such settings as Stackelberg games with side information, in which both players observe an external context before playing. The leader then commits to a (possibly context-dependent) strategy, and the follower best-responds to both the leader's strategy and the context. We focus on the online setting in which a sequence of followers arrive over time, and the context may change from round-to-round. In sharp contrast to the non-contextual version, we show that it is impossible for the leader to achieve good performance (measured by regret) in the full adversarial setting (i.e., when both the context and the follower are chosen by an adversary). However, it turns out that a little bit of randomness goes a long way. Motivated by our impossibility result, we show that no-regret learning is possible in two natural relaxations: the setting in which the sequence of followers is chosen stochastically and the sequence of contexts is adversarial, and the setting in which the sequence of contexts is stochastic and the sequence of followers is chosen by an adversary.
The integration of multimodal information into sequential recommender systems has attracted significant attention in recent research. In the initial stages of multimodal sequential recommendation models, the mainstream paradigm was ID-dominant recommendations, wherein multimodal information was fused as side information. However, due to their limitations in terms of transferability and information intrusion, another paradigm emerged, wherein multimodal features were employed directly for recommendation, enabling recommendation across datasets. Nonetheless, it overlooked user ID information, resulting in low information utilization and high training costs. To this end, we propose an innovative framework, BivRec, that jointly trains the recommendation tasks in both ID and multimodal views, leveraging their synergistic relationship to enhance recommendation performance bidirectionally. To tackle the information heterogeneity issue, we first construct structured user interest representations and then learn the synergistic relationship between them. Specifically, BivRec comprises three modules: Multi-scale Interest Embedding, comprehensively modeling user interests by expanding user interaction sequences with multi-scale patching; Intra-View Interest Decomposition, constructing highly structured interest representations using carefully designed Gaussian attention and Cluster attention; and Cross-View Interest Learning, learning the synergistic relationship between the two recommendation views through coarse-grained overall semantic similarity and fine-grained interest allocation similarity BiVRec achieves state-of-the-art performance on five datasets and showcases various practical advantages.
Cancer remains a global challenge due to its growing clinical and economic burden. Its uniquely personal manifestation, which makes treatment difficult, has fuelled the quest for personalized treatment strategies. Thus, genomic profiling is increasingly becoming part of clinical diagnostic panels. Effective use of such panels requires accurate drug response prediction (DRP) models, which are challenging to build due to limited labelled patient data. Previous methods to address this problem have used various forms of transfer learning. However, they do not explicitly model the variable length sequential structure of the list of mutations in such diagnostic panels. Further, they do not utilize auxiliary information (like patient survival) for model training. We address these limitations through a novel transformer based method, which surpasses the performance of state-of-the-art DRP models on benchmark data. We also present the design of a treatment recommendation system (TRS), which is currently deployed at the National University Hospital, Singapore and is being evaluated in a clinical trial.
Regional solar power forecasting, which involves predicting the total power generation from all rooftop photovoltaic systems in a region holds significant importance for various stakeholders in the energy sector. However, the vast amount of solar power generation and weather time series from geographically dispersed locations that need to be considered in the forecasting process makes accurate regional forecasting challenging. Therefore, previous work has limited the focus to either forecasting a single time series (i.e., aggregated time series) which is the addition of all solar generation time series in a region, disregarding the location-specific weather effects or forecasting solar generation time series of each PV site (i.e., individual time series) independently using location-specific weather data, resulting in a large number of forecasting models. In this work, we propose two deep-learning-based regional forecasting methods that can effectively leverage both types of time series (aggregated and individual) with weather data in a region. We propose two hierarchical temporal convolutional neural network architectures (HTCNN) and two strategies to adapt HTCNNs for regional solar power forecasting. At first, we explore generating a regional forecast using a single HTCNN. Next, we divide the region into multiple sub-regions based on weather information and train separate HTCNNs for each sub-region; the forecasts of each sub-region are then added to generate a regional forecast. The proposed work is evaluated using a large dataset collected over a year from 101 locations across Western Australia to provide a day ahead forecast. We compare our approaches with well-known alternative methods and show that the sub-region HTCNN requires fewer individual networks and achieves a forecast skill score of 40.2% reducing a statistically significant error by 6.5% compared to the best counterpart.
Highlighting particularly relevant regions of an image can improve the performance of vision-language models (VLMs) on various vision-language (VL) tasks by guiding the model to attend more closely to these regions of interest. For example, VLMs can be given a "visual prompt", where visual markers such as bounding boxes delineate key image regions. However, current VLMs that can incorporate visual guidance are either proprietary and expensive or require costly training on curated data that includes visual prompts. We introduce Contrastive Region Guidance (CRG), a training-free guidance method that enables open-source VLMs to respond to visual prompts. CRG contrasts model outputs produced with and without visual prompts, factoring out biases revealed by the model when answering without the information required to produce a correct answer (i.e., the model's prior). CRG achieves substantial improvements in a wide variety of VL tasks: When region annotations are provided, CRG increases absolute accuracy by up to 11.1% on ViP-Bench, a collection of six diverse region-based tasks such as recognition, math, and object relationship reasoning. We also show CRG's applicability to spatial reasoning, with 10% improvement on What'sUp, as well as to compositional generalization -- improving accuracy by 11.5% and 7.5% on two challenging splits from SugarCrepe -- and to image-text alignment for generated images, where we improve by up to 8.4 AUROC and 6.8 F1 points on SeeTRUE. When reference regions are absent, CRG allows us to re-rank proposed regions in referring expression comprehension and phrase grounding benchmarks like RefCOCO/+/g and Flickr30K Entities, with an average gain of 3.2% in accuracy. Our analysis explores alternative masking strategies for CRG, quantifies CRG's probability shift, and evaluates the role of region guidance strength, empirically validating CRG's design choices.
Unsupervised Graph Domain Adaptation (UGDA) has emerged as a practical solution to transfer knowledge from a label-rich source graph to a completely unlabelled target graph. However, most methods require a labelled source graph to provide supervision signals, which might not be accessible in the real-world settings due to regulations and privacy concerns. In this paper, we explore the scenario of source-free unsupervised graph domain adaptation, which tries to address the domain adaptation problem without accessing the labelled source graph. Specifically, we present a novel paradigm called GraphCTA, which performs model adaptation and graph adaptation collaboratively through a series of procedures: (1) conduct model adaptation based on node's neighborhood predictions in target graph considering both local and global information; (2) perform graph adaptation by updating graph structure and node attributes via neighborhood contrastive learning; and (3) the updated graph serves as an input to facilitate the subsequent iteration of model adaptation, thereby establishing a collaborative loop between model adaptation and graph adaptation. Comprehensive experiments are conducted on various public datasets. The experimental results demonstrate that our proposed model outperforms recent source-free baselines by large margins.
High-dimensional and complex spectral structures make clustering of hy-perspectral images (HSI) a challenging task. Subspace clustering has been shown to be an effective approach for addressing this problem. However, current subspace clustering algorithms are mainly designed for a single view and do not fully exploit spatial or texture feature information in HSI. This study proposed a multiview subspace clustering of HSI based on graph convolutional networks. (1) This paper uses the powerful classification ability of graph convolutional network and the learning ability of topologi-cal relationships between nodes to analyze and express the spatial relation-ship of HSI. (2) Pixel texture and pixel neighbor spatial-spectral infor-mation were sent to construct two graph convolutional subspaces. (3) An attention-based fusion module was used to adaptively construct a more discriminative feature map. The model was evaluated on three popular HSI datasets, including Indian Pines, Pavia University, and Houston. It achieved overall accuracies of 92.38%, 93.43%, and 83.82%, respectively and significantly outperformed the state-of-the-art clustering methods. In conclusion, the proposed model can effectively improve the clustering ac-curacy of HSI.