Classification of lung cancer subtypes on CT images with synthetic pathological priors

The accurate diagnosis on pathological subtypes for lung cancer is of significant importance for the follow-up treatments and prognosis managements. In this paper, we propose self-generating hybrid feature network (SGHF-Net) for accurately classifying lung cancer subtypes on computed tomography (CT) images. Inspired by studies stating that cross-scale associations exist in the image patterns between the same case's CT images and its pathological images, we innovatively developed a pathological feature synthetic module (PFSM), which quantitatively maps cross-modality associations through deep neural networks, to derive the "gold standard" information contained in the corresponding pathological images from CT images. Additionally, we designed a radiological feature extraction module (RFEM) to directly acquire CT image information and integrated it with the pathological priors under an effective feature fusion framework, enabling the entire classification model to generate more indicative and specific pathologically related features and eventually output more accurate predictions. The superiority of the proposed model lies in its ability to self-generate hybrid features that contain multi-modality image information based on a single-modality input. To evaluate the effectiveness, adaptability, and generalization ability of our model, we performed extensive experiments on a large-scale multi-center dataset (i.e., 829 cases from three hospitals) to compare our model and a series of state-of-the-art (SOTA) classification models. The experimental results demonstrated the superiority of our model for lung cancer subtypes classification with significant accuracy improvements in terms of accuracy (ACC), area under the curve (AUC), and F1 score.

Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction

Three-dimensional (3D) freehand ultrasound (US) reconstruction without using any additional external tracking device has seen recent advances with deep neural networks (DNNs). In this paper, we first investigated two identified contributing factors of the learned inter-frame correlation that enable the DNN-based reconstruction: anatomy and protocol. We propose to incorporate the ability to represent these two factors - readily available during training - as the privileged information to improve existing DNN-based methods. This is implemented in a new multi-task method, where the anatomical and protocol discrimination are used as auxiliary tasks. We further develop a differentiable network architecture to optimise the branching location of these auxiliary tasks, which controls the ratio between shared and task-specific network parameters, for maximising the benefits from the two auxiliary tasks. Experimental results, on a dataset with 38 forearms of 19 volunteers acquired with 6 different scanning protocols, show that 1) both anatomical and protocol variances are enabling factors for DNN-based US reconstruction; 2) learning how to discriminate different subjects (anatomical variance) and predefined types of scanning paths (protocol variance) both significantly improve frame prediction accuracy, volume reconstruction overlap, accumulated tracking error and final drift, using the proposed algorithm.

HODN: Disentangling Human-Object Feature for HOI Detection

The task of Human-Object Interaction (HOI) detection is to detect humans and their interactions with surrounding objects, where transformer-based methods show dominant advances currently. However, these methods ignore the relationship among humans, objects, and interactions: 1) human features are more contributive than object ones to interaction prediction; 2) interactive information disturbs the detection of objects but helps human detection. In this paper, we propose a Human and Object Disentangling Network (HODN) to model the HOI relationships explicitly, where humans and objects are first detected by two disentangling decoders independently and then processed by an interaction decoder. Considering that human features are more contributive to interaction, we propose a Human-Guide Linking method to make sure the interaction decoder focuses on the human-centric regions with human features as the positional embeddings. To handle the opposite influences of interactions on humans and objects, we propose a Stop-Gradient Mechanism to stop interaction gradients from optimizing the object detection but to allow them to optimize the human detection. Our proposed method achieves competitive performance on both the V-COCO and the HICO-Det datasets. It can be combined with existing methods easily for state-of-the-art results.

Real-Time Numerical Differentiation of Sampled Data Using Adaptive Input and State Estimation

Real-time numerical differentiation plays a crucial role in many digital control algorithms, such as PID control, which requires numerical differentiation to implement derivative action. This paper addresses the problem of numerical differentiation for real-time implementation with minimal prior information about the signal and noise using adaptive input and state estimation. Adaptive input estimation with adaptive state estimation (AIE/ASE) is based on retrospective cost input estimation, while adaptive state estimation is based on an adaptive Kalman filter in which the input-estimation error covariance and the measurement-noise covariance are updated online. The accuracy of AIE/ASE is compared numerically to several conventional numerical differentiation methods. Finally, AIE/ASE is applied to simulated vehicle position data generated from CarSim.

Dynamic Inter-treatment Information Sharing for Heterogeneous Treatment Effects Estimation

Existing heterogeneous treatment effects learners, also known as conditional average treatment effects (CATE) learners, lack a general mechanism for end-to-end inter-treatment information sharing, and data have to be split among potential outcome functions to train CATE learners which can lead to biased estimates with limited observational datasets. To address this issue, we propose a novel deep learning-based framework to train CATE learners that facilitates dynamic end-to-end information sharing among treatment groups. The framework is based on \textit{soft weight sharing} of \textit{hypernetworks}, which offers advantages such as parameter efficiency, faster training, and improved results. The proposed framework complements existing CATE learners and introduces a new class of uncertainty-aware CATE learners that we refer to as \textit{HyperCATE}. We develop HyperCATE versions of commonly used CATE learners and evaluate them on IHDP, ACIC-2016, and Twins benchmarks. Our experimental results show that the proposed framework improves the CATE estimation error via counterfactual inference, with increasing effectiveness for smaller datasets.

Uncertainty and Explainable Analysis of Machine Learning Model for Reconstruction of Sonic Slowness Logs

Logs are valuable information for oil and gas fields as they help to determine the lithology of the formations surrounding the borehole and the location and reserves of subsurface oil and gas reservoirs. However, important logs are often missing in horizontal or old wells, which poses a challenge in field applications. In this paper, we utilize data from the 2020 machine learning competition of the SPWLA, which aims to predict the missing compressional wave slowness and shear wave slowness logs using other logs in the same borehole. We employ the NGBoost algorithm to construct an Ensemble Learning model that can predicate the results as well as their uncertainty. Furthermore, we combine the SHAP method to investigate the interpretability of the machine learning model. We compare the performance of the NGBosst model with four other commonly used Ensemble Learning methods, including Random Forest, GBDT, XGBoost, LightGBM. The results show that the NGBoost model performs well in the testing set and can provide a probability distribution for the prediction results. In addition, the variance of the probability distribution of the predicted log can be used to justify the quality of the constructed log. Using the SHAP explainable machine learning model, we calculate the importance of each input log to the predicted results as well as the coupling relationship among input logs. Our findings reveal that the NGBoost model tends to provide greater slowness prediction results when the neutron porosity and gamma ray are large, which is consistent with the cognition of petrophysical models. Furthermore, the machine learning model can capture the influence of the changing borehole caliper on slowness, where the influence of borehole caliper on slowness is complex and not easy to establish a direct relationship. These findings are in line with the physical principle of borehole acoustics.

FoodSAM: Any Food Segmentation

In this paper, we explore the zero-shot capability of the Segment Anything Model (SAM) for food image segmentation. To address the lack of class-specific information in SAM-generated masks, we propose a novel framework, called FoodSAM. This innovative approach integrates the coarse semantic mask with SAM-generated masks to enhance semantic segmentation quality. Besides, we recognize that the ingredients in food can be supposed as independent individuals, which motivated us to perform instance segmentation on food images. Furthermore, FoodSAM extends its zero-shot capability to encompass panoptic segmentation by incorporating an object detector, which renders FoodSAM to effectively capture non-food object information. Drawing inspiration from the recent success of promptable segmentation, we also extend FoodSAM to promptable segmentation, supporting various prompt variants. Consequently, FoodSAM emerges as an all-encompassing solution capable of segmenting food items at multiple levels of granularity. Remarkably, this pioneering framework stands as the first-ever work to achieve instance, panoptic, and promptable segmentation on food images. Extensive experiments demonstrate the feasibility and impressing performance of FoodSAM, validating SAM's potential as a prominent and influential tool within the domain of food image segmentation. We release our code at https://github.com/jamesjg/FoodSAM.

Knowledge Prompt-tuning for Sequential Recommendation

Pre-trained language models (PLMs) have demonstrated strong performance in sequential recommendation (SR), which are utilized to extract general knowledge. However, existing methods still lack domain knowledge and struggle to capture users' fine-grained preferences. Meanwhile, many traditional SR methods improve this issue by integrating side information while suffering from information loss. To summarize, we believe that a good recommendation system should utilize both general and domain knowledge simultaneously. Therefore, we introduce an external knowledge base and propose Knowledge Prompt-tuning for Sequential Recommendation (\textbf{KP4SR}). Specifically, we construct a set of relationship templates and transform a structured knowledge graph (KG) into knowledge prompts to solve the problem of the semantic gap. However, knowledge prompts disrupt the original data structure and introduce a significant amount of noise. We further construct a knowledge tree and propose a knowledge tree mask, which restores the data structure in a mask matrix form, thus mitigating the noise problem. We evaluate KP4SR on three real-world datasets, and experimental results show that our approach outperforms state-of-the-art methods on multiple evaluation metrics. Specifically, compared with PLM-based methods, our method improves NDCG@5 and HR@5 by \textcolor{red}{40.65\%} and \textcolor{red}{36.42\%} on the books dataset, \textcolor{red}{11.17\%} and \textcolor{red}{11.47\%} on the music dataset, and \textcolor{red}{22.17\%} and \textcolor{red}{19.14\%} on the movies dataset, respectively. Our code is publicly available at the link: \href{https://github.com/zhaijianyang/KP4SR}{\textcolor{blue}{https://github.com/zhaijianyang/KP4SR}.}

FocusFlow: Boosting Key-Points Optical Flow Estimation for Autonomous Driving

Key-point-based scene understanding is fundamental for autonomous driving applications. At the same time, optical flow plays an important role in many vision tasks. However, due to the implicit bias of equal attention on all points, classic data-driven optical flow estimation methods yield less satisfactory performance on key points, limiting their implementations in key-point-critical safety-relevant scenarios. To address these issues, we introduce a points-based modeling method that requires the model to learn key-point-related priors explicitly. Based on the modeling method, we present FocusFlow, a framework consisting of 1) a mix loss function combined with a classic photometric loss function and our proposed Conditional Point Control Loss (CPCL) function for diverse point-wise supervision; 2) a conditioned controlling model which substitutes the conventional feature encoder by our proposed Condition Control Encoder (CCE). CCE incorporates a Frame Feature Encoder (FFE) that extracts features from frames, a Condition Feature Encoder (CFE) that learns to control the feature extraction behavior of FFE from input masks containing information of key points, and fusion modules that transfer the controlling information between FFE and CFE. Our FocusFlow framework shows outstanding performance with up to +44.5% precision improvement on various key points such as ORB, SIFT, and even learning-based SiLK, along with exceptional scalability for most existing data-driven optical flow methods like PWC-Net, RAFT, and FlowFormer. Notably, FocusFlow yields competitive or superior performances rivaling the original models on the whole frame. The source code will be available at https://github.com/ZhonghuaYi/FocusFlow_official.

Asking Before Action: Gather Information in Embodied Decision Making with Language Models

With strong capabilities of reasoning and a generic understanding of the world, Large Language Models (LLMs) have shown great potential in building versatile embodied decision making agents capable of performing diverse tasks. However, when deployed to unfamiliar environments, we show that LLM agents face challenges in efficiently gathering necessary information, leading to suboptimal performance. On the other hand, in unfamiliar scenarios, human individuals often seek additional information from their peers before taking action, leveraging external knowledge to avoid unnecessary trial and error. Building upon this intuition, we propose \textit{Asking Before Action} (ABA), a method that empowers the agent to proactively query external sources for pertinent information using natural language during their interactions in the environment. In this way, the agent is able to enhance its efficiency and performance by mitigating wasteful steps and circumventing the difficulties associated with exploration in unfamiliar environments. We empirically evaluate our method on an embodied decision making benchmark, ALFWorld, and demonstrate that despite modest modifications in prompts, our method exceeds baseline LLM agents by more than $40$%. Further experiments on two variants of ALFWorld illustrate that by imitation learning, ABA effectively retains and reuses queried and known information in subsequent tasks, mitigating the need for repetitive inquiries. Both qualitative and quantitative results exhibit remarkable performance on tasks that previous methods struggle to solve.