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"Information Extraction": models, code, and papers

An overview of event extraction and its applications

Nov 05, 2021
Jiangwei Liu, Liangyu Min, Xiaohong Huang

With the rapid development of information technology, online platforms have produced enormous text resources. As a particular form of Information Extraction (IE), Event Extraction (EE) has gained increasing popularity due to its ability to automatically extract events from human language. However, there are limited literature surveys on event extraction. Existing review works either spend much effort describing the details of various approaches or focus on a particular field. This study provides a comprehensive overview of the state-of-the-art event extraction methods and their applications from text, including closed-domain and open-domain event extraction. A trait of this survey is that it provides an overview in moderate complexity, avoiding involving too many details of particular approaches. This study focuses on discussing the common characters, application fields, advantages, and disadvantages of representative works, ignoring the specificities of individual approaches. Finally, we summarize the common issues, current solutions, and future research directions. We hope this work could help researchers and practitioners obtain a quick overview of recent event extraction.

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ViBERTgrid: A Jointly Trained Multi-Modal 2D Document Representation for Key Information Extraction from Documents

May 25, 2021
Weihong Lin, Qifang Gao, Lei Sun, Zhuoyao Zhong, Kai Hu, Qin Ren, Qiang Huo

Recent grid-based document representations like BERTgrid allow the simultaneous encoding of the textual and layout information of a document in a 2D feature map so that state-of-the-art image segmentation and/or object detection models can be straightforwardly leveraged to extract key information from documents. However, such methods have not achieved comparable performance to state-of-the-art sequence- and graph-based methods such as LayoutLM and PICK yet. In this paper, we propose a new multi-modal backbone network by concatenating a BERTgrid to an intermediate layer of a CNN model, where the input of CNN is a document image and the BERTgrid is a grid of word embeddings, to generate a more powerful grid-based document representation, named ViBERTgrid. Unlike BERTgrid, the parameters of BERT and CNN in our multimodal backbone network are trained jointly. Our experimental results demonstrate that this joint training strategy improves significantly the representation ability of ViBERTgrid. Consequently, our ViBERTgrid-based key information extraction approach has achieved state-of-the-art performance on real-world datasets.

* To be published at ICDAR 2021 
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Character Keypoint-based Homography Estimation in Scanned Documents for Efficient Information Extraction

Nov 14, 2019
Kushagra Mahajan, Monika Sharma, Lovekesh Vig

Precise homography estimation between multiple images is a pre-requisite for many computer vision applications. One application that is particularly relevant in today's digital era is the alignment of scanned or camera-captured document images such as insurance claim forms for information extraction. Traditional learning based approaches perform poorly due to the absence of an appropriate gradient. Feature based keypoint extraction techniques for homography estimation in real scene images either detect an extremely large number of inconsistent keypoints due to sharp textual edges, or produce inaccurate keypoint correspondences due to variations in illumination and viewpoint differences between document images. In this paper, we propose a novel algorithm for aligning scanned or camera-captured document images using character based keypoints and a reference template. The algorithm is both fast and accurate and utilizes a standard Optical character recognition (OCR) engine such as Tesseract to find character based unambiguous keypoints, which are utilized to identify precise keypoint correspondences between two images. Finally, the keypoints are used to compute the homography mapping between a test document and a template. We evaluated the proposed approach for information extraction on two real world anonymized datasets comprised of health insurance claim forms and the results support the viability of the proposed technique.

* 6 pages, 4 figures 
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Cross-Task Instance Representation Interactions and Label Dependencies for Joint Information Extraction with Graph Convolutional Networks

Mar 26, 2021
Minh Van Nguyen, Viet Dac Lai, Thien Huu Nguyen

Existing works on information extraction (IE) have mainly solved the four main tasks separately (entity mention recognition, relation extraction, event trigger detection, and argument extraction), thus failing to benefit from inter-dependencies between tasks. This paper presents a novel deep learning model to simultaneously solve the four tasks of IE in a single model (called FourIE). Compared to few prior work on jointly performing four IE tasks, FourIE features two novel contributions to capture inter-dependencies between tasks. First, at the representation level, we introduce an interaction graph between instances of the four tasks that is used to enrich the prediction representation for one instance with those from related instances of other tasks. Second, at the label level, we propose a dependency graph for the information types in the four IE tasks that captures the connections between the types expressed in an input sentence. A new regularization mechanism is introduced to enforce the consistency between the golden and predicted type dependency graphs to improve representation learning. We show that the proposed model achieves the state-of-the-art performance for joint IE on both monolingual and multilingual learning settings with three different languages.

* Accepted at NAACL-HLT 2021 
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Learning the grammar of prescription: recurrent neural network grammars for medication information extraction in clinical texts

Apr 24, 2020
Ivan Lerner, Jordan Jouffroy, Anita Burgun, Antoine Neuraz

In this study, we evaluated the RNNG, a neural top-down transition based parser, for medication information extraction in clinical texts. We evaluated this model on a French clinical corpus. The task was to extract the name of a drug (or class of drug), as well as fields informing its administration: frequency, dosage, duration, condition and route of administration. We compared the RNNG model that jointly identify entities and their relations with separate BiLSTMs models for entities and relations as baselines. We call seq-BiLSTMs the baseline models for relations extraction that takes as extra-input the output of the BiLSTMs for entities. RNNG outperforms seq-BiLSTM for identifying relations, with on average 88.5% [87.2-89.8] versus 84.6 [83.1-86.1] F-measure. However, RNNG is weaker than the baseline BiLSTM on detecting entities, with on average 82.4 [80.8-83.8] versus 84.1 [82.7-85.6] % F- measure. RNNG trained only for detecting relations is weaker than RNNG with the joint modelling objective, 87.4 [85.8-88.8] versus 88.5% [87.2-89.8]. The performance of RNNG on relations can be explained both by the model architecture, which provides shortcut between distant parts of the sentence, and the joint modelling objective which allow the RNNG to learn richer representations. RNNG is efficient for modeling relations between entities in medical texts and its performances are close to those of a BiLSTM for entity detection.

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Deep covariate-learning: optimising information extraction from terrain texture for geostatistical modelling applications

May 22, 2020
Charlie Kirkwood

Where data is available, it is desirable in geostatistical modelling to make use of additional covariates, for example terrain data, in order to improve prediction accuracy in the modelling task. While elevation itself may be important, additional explanatory power for any given problem can be sought (but not necessarily found) by filtering digital elevation models to extact higher-order derivatives such as slope angles, curvatures, and roughness. In essence, it would be beneficial to extract as much task-relevant information as possible from the elevation grid. However, given the complexities of the natural world, chance dictates that the use of 'off-the-shelf' filters is unlikely to derive covariates that provide strong explanatory power to the target variable at hand, and any attempt to manually design informative covariates is likely to be a trial-and-error process -- not optimal. In this paper we present a solution to this problem in the form of a deep learning approach to automatically deriving optimal task-specific terrain texture covariates from a standard SRTM 90m gridded digital elevation model (DEM). For our target variables we use point-sampled geochemical data from the British Geological Survey: concentrations of potassium, calcium and arsenic in stream sediments. We find that our deep learning approach produces covariates for geostatistical modelling that have surprisingly strong explanatory power on their own, with R-squared values around 0.6 for all three elements (with arsenic on the log scale). These results are achieved without the neural network being provided with easting, northing, or absolute elevation as inputs, and purely reflect the capacity of our deep neural network to extract task-specific information from terrain texture. We hope that these results will inspire further investigation into the capabilities of deep learning within geostatistical applications.

* 13 pages, 8 figures, to be submitted to journal 
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Data Mining of Causal Relations from Text: Analysing Maritime Accident Investigation Reports

Jul 09, 2015
Santosh Tirunagari

Text mining is a process of extracting information of interest from text. Such a method includes techniques from various areas such as Information Retrieval (IR), Natural Language Processing (NLP), and Information Extraction (IE). In this study, text mining methods are applied to extract causal relations from maritime accident investigation reports collected from the Marine Accident Investigation Branch (MAIB). These causal relations provide information on various mechanisms behind accidents, including human and organizational factors relating to the accident. The objective of this study is to facilitate the analysis of the maritime accident investigation reports, by means of extracting contributory causes with more feasibility. A careful investigation of contributory causes from the reports provide opportunity to improve safety in future. Two methods have been employed in this study to extract the causal relations. They are 1) Pattern classification method and 2) Connectives method. The earlier one uses naive Bayes and Support Vector Machines (SVM) as classifiers. The latter simply searches for the words connecting cause and effect in sentences. The causal patterns extracted using these two methods are compared to the manual (human expert) extraction. The pattern classification method showed a fair and sensible performance with F-measure(average) = 65% when compared to connectives method with F-measure(average) = 58%. This study is an evidence, that text mining methods could be employed in extracting causal relations from marine accident investigation reports.

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Clinical Relationships Extraction Techniques from Patient Narratives

Jun 21, 2013
Wafaa Tawfik Abdel-moneim, Mohamed Hashem Abdel-Aziz, Mohamed Monier Hassan

The Clinical E-Science Framework (CLEF) project was used to extract important information from medical texts by building a system for the purpose of clinical research, evidence-based healthcare and genotype-meets-phenotype informatics. The system is divided into two parts, one part concerns with the identification of relationships between clinically important entities in the text. The full parses and domain-specific grammars had been used to apply many approaches to extract the relationship. In the second part of the system, statistical machine learning (ML) approaches are applied to extract relationship. A corpus of oncology narratives that hand annotated with clinical relationships can be used to train and test a system that has been designed and implemented by supervised machine learning (ML) approaches. Many features can be extracted from these texts that are used to build a model by the classifier. Multiple supervised machine learning algorithms can be applied for relationship extraction. Effects of adding the features, changing the size of the corpus, and changing the type of the algorithm on relationship extraction are examined. Keywords: Text mining; information extraction; NLP; entities; and relations.

* IJCSI International Journal of Computer Science Issues, Vol.10, Issue 1, January 2013 
* 15 pages 13 figures 7 tables 
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Method of Tibetan Person Knowledge Extraction

Apr 11, 2016
Yuan Sun, Zhen Zhu

Person knowledge extraction is the foundation of the Tibetan knowledge graph construction, which provides support for Tibetan question answering system, information retrieval, information extraction and other researches, and promotes national unity and social stability. This paper proposes a SVM and template based approach to Tibetan person knowledge extraction. Through constructing the training corpus, we build the templates based the shallow parsing analysis of Tibetan syntactic, semantic features and verbs. Using the training corpus, we design a hierarchical SVM classifier to realize the entity knowledge extraction. Finally, experimental results prove the method has greater improvement in Tibetan person knowledge extraction.

* 6 pages 
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