Large Window-based Mamba UNet for Medical Image Segmentation: Beyond Convolution and Self-attention

In clinical practice, medical image segmentation provides useful information on the contours and dimensions of target organs or tissues, facilitating improved diagnosis, analysis, and treatment. In the past few years, convolutional neural networks (CNNs) and Transformers have dominated this area, but they still suffer from either limited receptive fields or costly long-range modeling. Mamba, a State Space Sequence Model (SSM), recently emerged as a promising paradigm for long-range dependency modeling with linear complexity. In this paper, we introduce a Large Window-based Mamba U}-shape Network, or LMa-UNet, for 2D and 3D medical image segmentation. A distinguishing feature of our LMa-UNet is its utilization of large windows, excelling in locally spatial modeling compared to small kernel-based CNNs and small window-based Transformers, while maintaining superior efficiency in global modeling compared to self-attention with quadratic complexity. Additionally, we design a novel hierarchical and bidirectional Mamba block to further enhance the global and neighborhood spatial modeling capability of Mamba. Comprehensive experiments demonstrate the effectiveness and efficiency of our method and the feasibility of using large window size to achieve large receptive fields. Codes are available at https://github.com/wjh892521292/LMa-UNet.

BraSyn 2023 challenge: Missing MRI synthesis and the effect of different learning objectives

This work addresses the Brain Magnetic Resonance Image Synthesis for Tumor Segmentation (BraSyn) challenge, which was hosted as part of the Brain Tumor Segmentation (BraTS) challenge in 2023. In this challenge, researchers are invited to synthesize a missing magnetic resonance image sequence, given other available sequences, to facilitate tumor segmentation pipelines trained on complete sets of image sequences. This problem can be tackled using deep learning within the framework of paired image-to-image translation. In this study, we propose investigating the effectiveness of a commonly used deep learning framework, such as Pix2Pix, trained under the supervision of different image-quality loss functions. Our results indicate that the use of different loss functions significantly affects the synthesis quality. We systematically study the impact of various loss functions in the multi-sequence MR image synthesis setting of the BraSyn challenge. Furthermore, we demonstrate how image synthesis performance can be optimized by combining different learning objectives beneficially.

FissionFusion: Fast Geometric Generation and Hierarchical Souping for Medical Image Analysis

The scarcity of well-annotated medical datasets requires leveraging transfer learning from broader datasets like ImageNet or pre-trained models like CLIP. Model soups averages multiple fine-tuned models aiming to improve performance on In-Domain (ID) tasks and enhance robustness against Out-of-Distribution (OOD) datasets. However, applying these methods to the medical imaging domain faces challenges and results in suboptimal performance. This is primarily due to differences in error surface characteristics that stem from data complexities such as heterogeneity, domain shift, class imbalance, and distributional shifts between training and testing phases. To address this issue, we propose a hierarchical merging approach that involves local and global aggregation of models at various levels based on models' hyperparameter configurations. Furthermore, to alleviate the need for training a large number of models in the hyperparameter search, we introduce a computationally efficient method using a cyclical learning rate scheduler to produce multiple models for aggregation in the weight space. Our method demonstrates significant improvements over the model souping approach across multiple datasets (around 6% gain in HAM10000 and CheXpert datasets) while maintaining low computational costs for model generation and selection. Moreover, we achieve better results on OOD datasets than model soups. The code is available at https://github.com/BioMedIA-MBZUAI/FissionFusion.

DetDiffusion: Synergizing Generative and Perceptive Models for Enhanced Data Generation and Perception

Current perceptive models heavily depend on resource-intensive datasets, prompting the need for innovative solutions. Leveraging recent advances in diffusion models, synthetic data, by constructing image inputs from various annotations, proves beneficial for downstream tasks. While prior methods have separately addressed generative and perceptive models, DetDiffusion, for the first time, harmonizes both, tackling the challenges in generating effective data for perceptive models. To enhance image generation with perceptive models, we introduce perception-aware loss (P.A. loss) through segmentation, improving both quality and controllability. To boost the performance of specific perceptive models, our method customizes data augmentation by extracting and utilizing perception-aware attribute (P.A. Attr) during generation. Experimental results from the object detection task highlight DetDiffusion's superior performance, establishing a new state-of-the-art in layout-guided generation. Furthermore, image syntheses from DetDiffusion can effectively augment training data, significantly enhancing downstream detection performance.

Brain Stroke Segmentation Using Deep Learning Models: A Comparative Study

Stroke segmentation plays a crucial role in the diagnosis and treatment of stroke patients by providing spatial information about affected brain regions and the extent of damage. Segmenting stroke lesions accurately is a challenging task, given that conventional manual techniques are time consuming and prone to errors. Recently, advanced deep models have been introduced for general medical image segmentation, demonstrating promising results that surpass many state of the art networks when evaluated on specific datasets. With the advent of the vision Transformers, several models have been introduced based on them, while others have aimed to design better modules based on traditional convolutional layers to extract long-range dependencies like Transformers. The question of whether such high-level designs are necessary for all segmentation cases to achieve the best results remains unanswered. In this study, we selected four types of deep models that were recently proposed and evaluated their performance for stroke segmentation: a pure Transformer-based architecture (DAE-Former), two advanced CNN-based models (LKA and DLKA) with attention mechanisms in their design, an advanced hybrid model that incorporates CNNs with Transformers (FCT), and the well-known self-adaptive nnUNet framework with its configuration based on given data. We examined their performance on two publicly available datasets, and found that the nnUNet achieved the best results with the simplest design among all. Revealing the robustness issue of Transformers to such variabilities serves as a potential reason for their weaker performance. Furthermore, nnUNet's success underscores the significant impact of preprocessing and postprocessing techniques in enhancing segmentation results, surpassing the focus solely on architectural designs

Investigation of the effectiveness of applying ChatGPT in Dialogic Teaching Using Electroencephalography

In recent years, the rapid development of artificial intelligence technology, especially the emergence of large language models (LLMs) such as ChatGPT, has presented significant prospects for application in the field of education. LLMs possess the capability to interpret knowledge, answer questions, and consider context, thus providing support for dialogic teaching to students. Therefore, an examination of the capacity of LLMs to effectively fulfill instructional roles, thereby facilitating student learning akin to human educators within dialogic teaching scenarios, is an exceptionally valuable research topic. This research recruited 34 undergraduate students as participants, who were randomly divided into two groups. The experimental group engaged in dialogic teaching using ChatGPT, while the control group interacted with human teachers. Both groups learned the histogram equalization unit in the information-related course "Digital Image Processing". The research findings show comparable scores between the two groups on the retention test. However, students who engaged in dialogue with ChatGPT exhibited lower performance on the transfer test. Electroencephalography data revealed that students who interacted with ChatGPT exhibited higher levels of cognitive activity, suggesting that ChatGPT could help students establish a knowledge foundation and stimulate cognitive activity. However, its strengths on promoting students. knowledge application and creativity were insignificant. Based upon the research findings, it is evident that ChatGPT cannot fully excel in fulfilling teaching tasks in the dialogue teaching in information related courses. Combining ChatGPT with traditional human teachers might be a more ideal approach. The synergistic use of both can provide students with more comprehensive learning support, thus contributing to enhancing the quality of teaching.

An Integrated Neighborhood and Scale Information Network for Open-Pit Mine Change Detection in High-Resolution Remote Sensing Images

Open-pit mine change detection (CD) in high-resolution (HR) remote sensing images plays a crucial role in mineral development and environmental protection. Significant progress has been made in this field in recent years, largely due to the advancement of deep learning techniques. However, existing deep-learning-based CD methods encounter challenges in effectively integrating neighborhood and scale information, resulting in suboptimal performance. Therefore, by exploring the influence patterns of neighborhood and scale information, this paper proposes an Integrated Neighborhood and Scale Information Network (INSINet) for open-pit mine CD in HR remote sensing images. Specifically, INSINet introduces 8-neighborhood-image information to acquire a larger receptive field, improving the recognition of center image boundary regions. Drawing on techniques of skip connection, deep supervision, and attention mechanism, the multi-path deep supervised attention (MDSA) module is designed to enhance multi-scale information fusion and change feature extraction. Experimental analysis reveals that incorporating neighborhood and scale information enhances the F1 score of INSINet by 6.40%, with improvements of 3.08% and 3.32% respectively. INSINet outperforms existing methods with an Overall Accuracy of 97.69%, Intersection over Union of 71.26%, and F1 score of 83.22%. INSINet shows significance for open-pit mine CD in HR remote sensing images.

VisionGPT-3D: A Generalized Multimodal Agent for Enhanced 3D Vision Understanding

The evolution of text to visual components facilitates people's daily lives, such as generating image, videos from text and identifying the desired elements within the images. Computer vision models involving the multimodal abilities in the previous days are focused on image detection, classification based on well-defined objects. Large language models (LLMs) introduces the transformation from nature language to visual objects, which present the visual layout for text contexts. OpenAI GPT-4 has emerged as the pinnacle in LLMs, while the computer vision (CV) domain boasts a plethora of state-of-the-art (SOTA) models and algorithms to convert 2D images to their 3D representations. However, the mismatching between the algorithms with the problem could lead to undesired results. In response to this challenge, we propose an unified VisionGPT-3D framework to consolidate the state-of-the-art vision models, thereby facilitating the development of vision-oriented AI. VisionGPT-3D provides a versatile multimodal framework building upon the strengths of multimodal foundation models. It seamlessly integrates various SOTA vision models and brings the automation in the selection of SOTA vision models, identifies the suitable 3D mesh creation algorithms corresponding to 2D depth maps analysis, generates optimal results based on diverse multimodal inputs such as text prompts. Keywords: VisionGPT-3D, 3D vision understanding, Multimodal agent

Privacy-Preserving Face Recognition Using Trainable Feature Subtraction

The widespread adoption of face recognition has led to increasing privacy concerns, as unauthorized access to face images can expose sensitive personal information. This paper explores face image protection against viewing and recovery attacks. Inspired by image compression, we propose creating a visually uninformative face image through feature subtraction between an original face and its model-produced regeneration. Recognizable identity features within the image are encouraged by co-training a recognition model on its high-dimensional feature representation. To enhance privacy, the high-dimensional representation is crafted through random channel shuffling, resulting in randomized recognizable images devoid of attacker-leverageable texture details. We distill our methodologies into a novel privacy-preserving face recognition method, MinusFace. Experiments demonstrate its high recognition accuracy and effective privacy protection. Its code is available at https://github.com/Tencent/TFace.

IRConStyle: Image Restoration Framework Using Contrastive Learning and Style Transfer

Recently, the contrastive learning paradigm has achieved remarkable success in high-level tasks such as classification, detection, and segmentation. However, contrastive learning applied in low-level tasks, like image restoration, is limited, and its effectiveness is uncertain. This raises a question: Why does the contrastive learning paradigm not yield satisfactory results in image restoration? In this paper, we conduct in-depth analyses and propose three guidelines to address the above question. In addition, inspired by style transfer and based on contrastive learning, we propose a novel module for image restoration called \textbf{ConStyle}, which can be efficiently integrated into any U-Net structure network. By leveraging the flexibility of ConStyle, we develop a \textbf{general restoration network} for image restoration. ConStyle and the general restoration network together form an image restoration framework, namely \textbf{IRConStyle}. To demonstrate the capability and compatibility of ConStyle, we replace the general restoration network with transformer-based, CNN-based, and MLP-based networks, respectively. We perform extensive experiments on various image restoration tasks, including denoising, deblurring, deraining, and dehazing. The results on 19 benchmarks demonstrate that ConStyle can be integrated with any U-Net-based network and significantly enhance performance. For instance, ConStyle NAFNet significantly outperforms the original NAFNet on SOTS outdoor (dehazing) and Rain100H (deraining) datasets, with PSNR improvements of 4.16 dB and 3.58 dB with 85% fewer parameters.