Learning from Heterophilic Graphs: A Spectral Theory Perspective on the Impact of Self-Loops and Parallel Edges

Graph heterophily poses a formidable challenge to the performance of Message-passing Graph Neural Networks (MP-GNNs). The familiar low-pass filters like Graph Convolutional Networks (GCNs) face performance degradation, which can be attributed to the blending of the messages from dissimilar neighboring nodes. The performance of the low-pass filters on heterophilic graphs still requires an in-depth analysis. In this context, we update the heterophilic graphs by adding a number of self-loops and parallel edges. We observe that eigenvalues of the graph Laplacian decrease and increase respectively by increasing the number of self-loops and parallel edges. We conduct several studies regarding the performance of GCN on various benchmark heterophilic networks by adding either self-loops or parallel edges. The studies reveal that the GCN exhibited either increasing or decreasing performance trends on adding self-loops and parallel edges. In light of the studies, we established connections between the graph spectra and the performance trends of the low-pass filters on the heterophilic graphs. The graph spectra characterize the essential intrinsic properties of the input graph like the presence of connected components, sparsity, average degree, cluster structures, etc. Our work is adept at seamlessly evaluating graph spectrum and properties by observing the performance trends of the low-pass filters without pursuing the costly eigenvalue decomposition. The theoretical foundations are also discussed to validate the impact of adding self-loops and parallel edges on the graph spectrum.